Mercurial > repos > nml > mykrobe_parser

annotate test-data/prediction_2020/output-jsondata.csv @ 7:12b397ad8687 draft default tip

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planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 97945a3ad655f1a0f99f577d0d423124460d900a
author nml
date Tue, 24 Oct 2023 21:28:06 +0000
parents 8e7e5a660942
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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6
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
1 "file","phylo_group","species","phylo_group_per_covg","species_per_covg","phylo_group_depth","species_depth"
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
2 "ERR031480_L6","Mycobacterium_tuberculosis_complex","Mycobacterium_africanum",99.776,89.738,136,167
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
3 "ERR125628_MBOV","Mycobacterium_tuberculosis_complex","Mycobacterium_bovis",99.425,65.402,56,48
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
4 "ERR181314_L9","Mycobacterium_tuberculosis_complex","Mycobacterium_africanum",99.672,75.016,171,90.5
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
5 "ERR234162_L3","Mycobacterium_tuberculosis_complex","Mycobacterium_tuberculosis",99.797,99.33,157,142
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
6 "ERR2659153","Mycobacterium_tuberculosis_complex","Mycobacterium_africanum",99.492,64.411,75,79
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
7 "ERR266106_MCAN","Mycobacterium_tuberculosis_complex","Mycobacterium_tuberculosis",98.352,73.899,100,92
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
8 "ERR2704812_L5","Mycobacterium_tuberculosis_complex","Mycobacterium_africanum",98.467,64.333,332,326
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
9 "ERR3335753_L1","Mycobacterium_tuberculosis_complex","Mycobacterium_tuberculosis",99.69,98.335,236,220
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
10 "ERR4143897_MPIN","Mycobacterium_tuberculosis_complex","Mycobacterium_microti",99.162,52.314,61,55
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
11 "ERR756348_L7","Mycobacterium_tuberculosis_complex","Mycobacterium_tuberculosis",99.033,83.208,173,162
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
12 "ERR841495_L5","Mycobacterium_tuberculosis_complex","Mycobacterium_africanum",99.715,57.895,137,123
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
13 "SRR17089001","Mycobacterium_tuberculosis_complex","Mycobacterium_africanum",99.448,54.809,240,263
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
14 "SRR1710097_L2","Mycobacterium_tuberculosis_complex","Mycobacterium_tuberculosis",99.686,98.909,420,403
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
15 "SRR3500411_MMUN","Mycobacterium_tuberculosis_complex","Mycobacterium_africanum",99.568,62.167,114,94
8e7e5a660942 planemo upload for repository https://github.com/phac-nml/mykrobe-parser commit 077a66175f3666924b42f216bbcb671ee0d026f2
nml
parents:
diff changeset
16 "SRR9157804","Mycobacterium_tuberculosis_complex","Mycobacterium_africanum",99.547,55.332,123,111