{
    "ERR2704812_L5": {
        "susceptibility": {
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                "predict": "S"
            },
            "Moxifloxacin": {
                "predict": "S"
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            "Isoniazid": {
                "predict": "R",
                "called_by": {
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                                    "median_depth": 0,
                                    "min_non_zero_depth": 0,
                                    "kmer_count": 0,
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                                    "min_non_zero_depth": 352,
                                    "kmer_count": 7229,
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                            "expected_depths": [
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                        "_cls": "Call.VariantCall"
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            },
            "Kanamycin": {
                "predict": "S"
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            "Ethambutol": {
                "predict": "S"
            },
            "Streptomycin": {
                "predict": "S"
            },
            "Ciprofloxacin": {
                "predict": "S"
            },
            "Pyrazinamide": {
                "predict": "S"
            },
            "Rifampicin": {
                "predict": "R",
                "called_by": {
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                                    "median_depth": 0,
                                    "min_non_zero_depth": 0,
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            },
            "Amikacin": {
                "predict": "S"
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            "Capreomycin": {
                "predict": "S"
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        },
        "phylogenetics": {
            "phylo_group": {
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                    "percent_coverage": 98.467,
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                }
            },
            "sub_complex": {
                "Unknown": {
                    "percent_coverage": -1,
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            "species": {
                "Mycobacterium_africanum": {
                    "percent_coverage": 64.333,
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            },
            "lineage": {
                "Unknown": {
                    "percent_coverage": -1,
                    "median_depth": -1
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        },
        "kmer": 21,
        "probe_sets": [
            "tb-species-170421.fasta.gz",
            "tb-hunt-probe-set-jan-03-2019.fasta.gz"
        ],
        "files": [
            "ERR2704812_1.fastq",
            "ERR2704812_2.fastq"
        ],
        "version": {
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            "mykrobe-atlas": "v0.10.0"
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        "genotype_model": "kmer_count"
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}