Mercurial > repos > nml > package_python_3_4_hppy_0_9_6

comparison tool_dependencies.xml @ 5:46decde5b780 draft default tip

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planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/packages/package_python_3_4_hppy_0_9_6 commit e2554dc878f6abf1c02ed9e6e4f4440ed32b02aa-dirty
author nml
date Thu, 07 Jul 2016 13:19:28 -0400
parents a3569ef6d0ff
children
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4:a3569ef6d0ff 5:46decde5b780
5 </package> 5 </package>
6 <package name="cython" version="0.23.4"> 6 <package name="cython" version="0.23.4">
7 <repository changeset_revision="52c11d398790" name="package_python_3_4_cython_0_23_4" owner="nml" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="52c11d398790" name="package_python_3_4_cython_0_23_4" owner="nml" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="hyphy-python" version="0.1.3"> 9 <package name="hyphy-python" version="0.1.3">
10 <repository changeset_revision="86947a99997b" name="package_python_3_4_hyphy_python_0_1_3" owner="nml" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="5c14a49141f0" name="package_python_3_4_hyphy_python_0_1_3" owner="nml" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="fakemp" version="0.9.1"> 12 <package name="fakemp" version="0.9.1">
13 <repository changeset_revision="13da2754601c" name="package_python_3_4_fakemp_0_9_1" owner="nml" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="13da2754601c" name="package_python_3_4_fakemp_0_9_1" owner="nml" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 <package name="hppy" version="0.9.6"> 15 <package name="hppy" version="0.9.6">
16 <install version="1.0"> 16 <install version="1.0">
17 <actions> 17 <actions>
18 <action type="download_by_url">https://github.com/veg/hppy/archive/0.9.6.tar.gz</action> 18 <action type="download_by_url">https://github.com/veg/hppy/archive/0.9.6.tar.gz</action>
19 <action type="set_environment_for_install"> 19 <action type="set_environment_for_install">
20 <repository changeset_revision="86947a99997b" name="package_python_3_4_hyphy_python_0_1_3" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> 20 <repository changeset_revision="5c14a49141f0" name="package_python_3_4_hyphy_python_0_1_3" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu">
21 <package name="hyphy-python" version="0.1.3" /> 21 <package name="hyphy-python" version="0.1.3" />
22 </repository> 22 </repository>
23 <repository changeset_revision="20ecf5cd3c0e" name="package_python_3_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 23 <repository changeset_revision="20ecf5cd3c0e" name="package_python_3_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
24 <package name="python" version="3.4" /> 24 <package name="python" version="3.4" />
25 </repository> 25 </repository>
31 </repository> 31 </repository>
32 </action> 32 </action>
33 <action type="make_directory">$INSTALL_DIR/lib/python</action> 33 <action type="make_directory">$INSTALL_DIR/lib/python</action>
34 <action type="shell_command"> 34 <action type="shell_command">
35 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 35 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
36 echo $PYTHONPATH &amp;&amp;
37 python3 setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin 36 python3 setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
38 </action> 37 </action>
39 <action type="set_environment"> 38 <action type="set_environment">
40 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> 39 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
41 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_HYPHY_PYTHON]</environment_variable> 40 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_HYPHY_PYTHON]</environment_variable>