Mercurial > repos > nml > package_spolpred_1_0_0
annotate tool_dependencies.xml @ 0:bb26e23d7178 draft default tip
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
| author | nml |
|---|---|
| date | Tue, 15 Dec 2015 14:18:56 -0500 |
| parents | |
| children |
| rev | line source |
|---|---|
|
0
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
2 <tool_dependency> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
3 <package name="spolpred" version="1.0.0"> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
4 <install version="1.0"> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
5 <actions> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
6 <action type="make_directory">spolpred</action> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
7 <action type="change_directory">spolpred</action> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
8 <action type="shell_command">wget "http://pathogenseq.lshtm.ac.uk/downloads/spolpred.cpp"</action> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
9 <action type="shell_command">g++ spolpred.cpp</action> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
10 <action type="shell_command">mv a.out spolpred</action> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
11 <action type="set_environment"> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/spolpred</environment_variable> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
13 </action> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
14 </actions> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
15 </install> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
16 <readme> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
17 This installs SpolPred 1.0.0. |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
18 |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
19 See manual here http://pathogenseq.lshtm.ac.uk/downloads/spolpredmanual.pdf |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
20 See also here http://pathogenseq.lshtm.ac.uk/spolpred |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
21 </readme> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
22 </package> |
|
bb26e23d7178
planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
nml
parents:
diff
changeset
|
23 </tool_dependency> |
