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view test-data/lineage_report.tsv @ 4:35566aadcfc7 draft

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"planemo upload for repository https://github.com/hCoV-2019/pangolin commit 20e8d283d6080a62d53b941f130552eaf2e69db1"
author nml
date Thu, 14 May 2020 20:53:17 -0400
parents 24c005390360
children
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taxon	lineage	SH-alrt	UFbootstrap	lineages_version	status	note
Japan/DP0779/2020|EPI_ISL_416626||Japan|unknown||2020-02-17	B	100	100	2020-05-07	passed_qc	
USA/NY-NYUMC7/2020|EPI_ISL_418192||USA|New_York|Manhattan|2020-03-16	B.1	100	100	2020-05-07	passed_qc	
This_seq_has_no_seq	None	0	0	2020-05-07	fail	seq_len:0
This_seq_is_too_short	None	0	0	2020-05-07	fail	seq_len:2997
This_seq_has_lots_of_Ns	None	0	0	2020-05-07	fail	N_content:0.98
This_seq_is_literally_just_N	None	0	0	2020-05-07	fail	N_content:1.0