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comparison aacoverage.xml @ 7:dcd43b402eb3 draft

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planemo upload for repository https://github.com/phac-nml/quasitools commit ce3f1b19e7e110ff47365c672bc6fa17cce0a314
author nml
date Fri, 23 Nov 2018 15:43:16 -0500
parents b69e898b8109
children 9def47f3c1e4
comparison
equal deleted inserted replaced
6:9fb9fed71486 7:dcd43b402eb3
1 <tool id="aacoverage" name="Amino Acid Coverage" version="0.4.2"> 1 <tool id="aacoverage" name="Amino Acid Coverage" version="0.4.2">
2 <description>Builds an aa census and returns its coverage</description> 2 <description>Builds an aa census and returns its coverage</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.4.2">quasitools</requirement> 4 <requirement type="package" version="0.5.1">quasitools</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
7 7
8 ln -f -s ${input_bam.metadata.bam_index} ${input_bam}.bai && 8 ln -f -s ${input_bam.metadata.bam_index} ${input_bam}.bai &&
9 9
43 43
44 A file with one entry per line with the AA position and the coverage at the position. 44 A file with one entry per line with the AA position and the coverage at the position.
45 45
46 ]]></help> 46 ]]></help>
47 <citations> 47 <citations>
48 <citation type="bibtex">
49 @misc{GitHubquasitoolsaacoverage,
50 title = {quasitools aacoverage},
51 publisher = {phac-nml},
52 journal = {GitHub repository},
53 url = {https://github.com/phac-nml/quasitools},
54 }
55 </citation>
48 </citations> 56 </citations>
49 </tool> 57 </tool>