Mercurial > repos > nml > quasitools

diff dnds.xml @ 9:18aad692772a draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/phac-nml/quasitools commit 5a9e4c9a582828654893166caf20576f5e0c418e
author nml
date Mon, 20 Jun 2022 20:06:36 +0000
parents 9def47f3c1e4
children
line wrap: on
line diff
--- a/dnds.xml	Tue Aug 06 08:50:28 2019 -0400
+++ b/dnds.xml	Mon Jun 20 20:06:36 2022 +0000
@@ -1,8 +1,9 @@
-<tool id="dnds" name="dNdS Report" version="0.7.0">
+<tool id="dnds" name="dNdS Report" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
     <description>Calculate the dN/dS value for each region in a bed file</description>
-    <requirements>
-          <requirement type="package" version="0.7.0">quasitools</requirement>
-    </requirements>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements"/>
     <command detect_errors="exit_code"><![CDATA[
 
         quasitools dnds $csv_file $ref_file $offset -o output.csv
@@ -36,14 +37,5 @@
 Determines the dNdS ratio for each codon variant in a supplied csv file (codon variants).
 
     ]]></help>
-    <citations>
-		<citation type="bibtex">
-			@misc{GitHubquasitoolsdnds,
-			title = {quasitools dnds},
-			publisher = {phac-nml},
-			journal = {GitHub repository},
-			url = {https://github.com/phac-nml/quasitools},
-			}
-		</citation>
-    </citations>
+    <expand macro="citations" />
 </tool>