Mercurial > repos > nml > quasitools
view test-data/nt_variants.vcf @ 5:b69e898b8109 draft
planemo upload for repository https://github.com/phac-nml/quasitools commit e30c0687f755a46c5b3bd265a1478a1abf5dc9f1
| author | nml |
|---|---|
| date | Fri, 24 Aug 2018 16:50:28 -0400 |
| parents | 71976cfc9022 |
| children |
line wrap: on
line source
##fileformat=VCFv4.2 ##fileDate=20170330 ##source=HyDRA ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> ##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele Count"> ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency"> ##FILTER=<ID=q30,Description="Quality below 30"> ##FILTER=<ID=dp100,Description="Read depth below 100"> ##FILTER=<ID=ac5,Description="Allele count below 5"> #CHROM POS ID REF ALT QUAL FILTER INFO hxb2_pol 237 . t c 3.000000000000000000000000 q30;ac5 DP=315;AC=1;AF=0.0032 hxb2_pol 238 . a t 3.000000000000000000000000 q30;ac5 DP=317;AC=1;AF=0.0032 hxb2_pol 239 . c a 3.000000000000000000000000 q30;ac5 DP=321;AC=1;AF=0.0031 hxb2_pol 240 . a c 3.000000000000000000000000 q30;ac5 DP=323;AC=1;AF=0.0031 hxb2_pol 241 . c a 3.000000000000000000000000 q30;ac5 DP=325;AC=1;AF=0.0031 hxb2_pol 291 . a t 2.000000000000000000000000 q30;ac5 DP=384;AC=1;AF=0.0026 hxb2_pol 294 . t a 7.000000000000000000000000 q30;ac5 DP=377;AC=2;AF=0.0053 hxb2_pol 297 . t c 2.000000000000000000000000 q30;ac5 DP=392;AC=1;AF=0.0026 hxb2_pol 304 . a g 2.000000000000000000000000 q30;ac5 DP=397;AC=1;AF=0.0025 hxb2_pol 305 . g c 2.000000000000000000000000 q30;ac5 DP=400;AC=1;AF=0.0025 hxb2_pol 310 . a t 2.000000000000000000000000 q30;ac5 DP=406;AC=1;AF=0.0025 hxb2_pol 311 . t a 2.000000000000000000000000 q30;ac5 DP=405;AC=1;AF=0.0025 hxb2_pol 324 . a c 2.000000000000000000000000 q30;ac5 DP=419;AC=1;AF=0.0024 hxb2_pol 325 . g a 2.000000000000000000000000 q30;ac5 DP=420;AC=1;AF=0.0024 hxb2_pol 326 . t g 2.000000000000000000000000 q30;ac5 DP=423;AC=1;AF=0.0024 hxb2_pol 327 . a t 2.000000000000000000000000 q30;ac5 DP=401;AC=1;AF=0.0025 hxb2_pol 332 . t a 6.000000000000000000000000 q30;ac5 DP=428;AC=2;AF=0.0047 hxb2_pol 336 . g a 2.000000000000000000000000 q30;ac5 DP=434;AC=1;AF=0.0023 hxb2_pol 337 . c g 2.000000000000000000000000 q30;ac5 DP=430;AC=1;AF=0.0023 hxb2_pol 339 . a c 2.000000000000000000000000 q30;ac5 DP=436;AC=1;AF=0.0023 hxb2_pol 340 . g a 2.000000000000000000000000 q30;ac5 DP=436;AC=1;AF=0.0023 hxb2_pol 342 . a g 2.000000000000000000000000 q30;ac5 DP=437;AC=1;AF=0.0023 hxb2_pol 344 . t a 2.000000000000000000000000 q30;ac5 DP=443;AC=1;AF=0.0023 hxb2_pol 345 . g t 2.000000000000000000000000 q30;ac5 DP=443;AC=1;AF=0.0023 hxb2_pol 354 . a c 6.000000000000000000000000 q30;ac5 DP=428;AC=2;AF=0.0047 hxb2_pol 358 . g a 6.000000000000000000000000 q30;ac5 DP=446;AC=2;AF=0.0045 hxb2_pol 359 . t g 6.000000000000000000000000 q30;ac5 DP=446;AC=2;AF=0.0045 hxb2_pol 361 . a t 6.000000000000000000000000 q30;ac5 DP=445;AC=2;AF=0.0045 hxb2_pol 363 . a c 2.000000000000000000000000 q30;ac5 DP=455;AC=1;AF=0.0022 hxb2_pol 364 . c a 2.000000000000000000000000 q30;ac5 DP=459;AC=1;AF=0.0022 hxb2_pol 366 . a t 2.000000000000000000000000 q30;ac5 DP=464;AC=1;AF=0.0022 hxb2_pol 371 . c a 2.000000000000000000000000 q30;ac5 DP=463;AC=1;AF=0.0022 hxb2_pol 372 . a t 2.000000000000000000000000 q30;ac5 DP=463;AC=1;AF=0.0022 hxb2_pol 388 . a t 3.000000000000000000000000 q30;ac5 DP=270;AC=1;AF=0.0037 hxb2_pol 389 . t a 9.000000000000000000000000 q30;ac5 DP=271;AC=2;AF=0.0074 hxb2_pol 390 . a t 3.000000000000000000000000 q30;ac5 DP=273;AC=1;AF=0.0037 hxb2_pol 393 . a g 3.000000000000000000000000 q30;ac5 DP=277;AC=1;AF=0.0036 hxb2_pol 394 . g c 3.000000000000000000000000 q30;ac5 DP=278;AC=1;AF=0.0036 hxb2_pol 407 . t a 3.000000000000000000000000 q30;ac5 DP=296;AC=1;AF=0.0034 hxb2_pol 425 . a g 2.000000000000000000000000 q30;ac5 DP=343;AC=1;AF=0.0029 hxb2_pol 426 . g a 2.000000000000000000000000 q30;ac5 DP=342;AC=1;AF=0.0029 hxb2_pol 427 . g a 2.000000000000000000000000 q30;ac5 DP=342;AC=1;AF=0.0029 hxb2_pol 428 . a g 7.000000000000000000000000 q30;ac5 DP=344;AC=2;AF=0.0058 hxb2_pol 429 . a g 2.000000000000000000000000 q30;ac5 DP=343;AC=1;AF=0.0029 hxb2_pol 430 . g a 7.000000000000000000000000 q30;ac5 DP=339;AC=2;AF=0.0059 hxb2_pol 432 . g a 2.000000000000000000000000 q30;ac5 DP=337;AC=1;AF=0.0030 hxb2_pol 433 . a g 8.000000000000000000000000 q30;ac5 DP=327;AC=2;AF=0.0061 hxb2_pol 436 . a t 3.000000000000000000000000 q30;ac5 DP=330;AC=1;AF=0.0030 hxb2_pol 437 . t a 22.00000000000000000000000 q30;ac5 DP=321;AC=4;AF=0.0125 hxb2_pol 439 . t c 22.00000000000000000000000 q30;ac5 DP=329;AC=4;AF=0.0122 hxb2_pol 440 . c a 31.00000000000000000000000 PASS DP=327;AC=5;AF=0.0153 hxb2_pol 440 . c t 22.00000000000000000000000 q30;ac5 DP=327;AC=4;AF=0.0122 hxb2_pol 441 . a c 23.00000000000000000000000 q30;ac5 DP=304;AC=4;AF=0.0132 hxb2_pol 445 . a t 3.000000000000000000000000 q30;ac5 DP=323;AC=1;AF=0.0031 hxb2_pol 447 . t g 3.000000000000000000000000 q30;ac5 DP=326;AC=1;AF=0.0031 hxb2_pol 450 . g c 3.000000000000000000000000 q30;ac5 DP=330;AC=1;AF=0.0030 hxb2_pol 452 . c t 3.000000000000000000000000 q30;ac5 DP=331;AC=1;AF=0.0030 hxb2_pol 453 . t g 3.000000000000000000000000 q30;ac5 DP=331;AC=1;AF=0.0030 hxb2_pol 454 . g a 2.000000000000000000000000 q30;ac5 DP=333;AC=1;AF=0.0030 hxb2_pol 508 . t a 2.000000000000000000000000 q30;ac5 DP=344;AC=1;AF=0.0029 hxb2_pol 509 . g t 2.000000000000000000000000 q30;ac5 DP=346;AC=1;AF=0.0029 hxb2_pol 511 . a g 2.000000000000000000000000 q30;ac5 DP=347;AC=1;AF=0.0029 hxb2_pol 512 . g a 2.000000000000000000000000 q30;ac5 DP=348;AC=1;AF=0.0029 hxb2_pol 513 . a g 2.000000000000000000000000 q30;ac5 DP=336;AC=1;AF=0.0030 hxb2_pol 542 . a g 2.000000000000000000000000 q30;ac5 DP=366;AC=1;AF=0.0027 hxb2_pol 543 . g a 2.000000000000000000000000 q30;ac5 DP=366;AC=1;AF=0.0027 hxb2_pol 544 . a g 2.000000000000000000000000 q30;ac5 DP=366;AC=1;AF=0.0027 hxb2_pol 545 . g a 2.000000000000000000000000 q30;ac5 DP=366;AC=1;AF=0.0027 hxb2_pol 581 . c a 2.000000000000000000000000 q30;ac5 DP=417;AC=1;AF=0.0024 hxb2_pol 582 . a c 2.000000000000000000000000 q30;ac5 DP=420;AC=1;AF=0.0024 hxb2_pol 583 . c a 2.000000000000000000000000 q30;ac5 DP=422;AC=1;AF=0.0024 hxb2_pol 584 . a t 2.000000000000000000000000 q30;ac5 DP=423;AC=1;AF=0.0024 hxb2_pol 592 . g a 2.000000000000000000000000 q30;ac5 DP=399;AC=1;AF=0.0025 hxb2_pol 603 . g a 13.00000000000000000000000 q30;ac5 DP=151;AC=2;AF=0.0132 hxb2_pol 604 . a g 24.00000000000000000000000 q30;ac5 DP=148;AC=3;AF=0.0203 hxb2_pol 606 . a c 100.0000000000000000000000 PASS DP=157;AC=12;AF=0.0764 hxb2_pol 606 . a t 34.00000000000000000000000 ac5 DP=157;AC=4;AF=0.0255 hxb2_pol 607 . a c 13.00000000000000000000000 q30;ac5 DP=159;AC=2;AF=0.0126 hxb2_pol 626 . a g 3.000000000000000000000000 q30;ac5 DP=250;AC=1;AF=0.0040 hxb2_pol 627 . t a 3.000000000000000000000000 q30;ac5 DP=253;AC=1;AF=0.0040 hxb2_pol 628 . g t 3.000000000000000000000000 q30;ac5 DP=255;AC=1;AF=0.0039 hxb2_pol 629 . t g 3.000000000000000000000000 q30;ac5 DP=256;AC=1;AF=0.0039 hxb2_pol 641 . a t 3.000000000000000000000000 q30;ac5 DP=287;AC=1;AF=0.0035 hxb2_pol 646 . t c 33.00000000000000000000000 PASS DP=299;AC=5;AF=0.0167 hxb2_pol 647 . c a 33.00000000000000000000000 PASS DP=300;AC=5;AF=0.0167 hxb2_pol 648 . a c 3.000000000000000000000000 q30;ac5 DP=300;AC=1;AF=0.0033 hxb2_pol 648 . a g 23.00000000000000000000000 q30;ac5 DP=300;AC=4;AF=0.0133 hxb2_pol 649 . g a 3.000000000000000000000000 q30;ac5 DP=306;AC=1;AF=0.0033 hxb2_pol 649 . g t 32.00000000000000000000000 PASS DP=306;AC=5;AF=0.0163 hxb2_pol 650 . t g 3.000000000000000000000000 q30;ac5 DP=314;AC=1;AF=0.0032 hxb2_pol 651 . t c 14.00000000000000000000000 q30;ac5 DP=326;AC=3;AF=0.0092 hxb2_pol 652 . c t 2.000000000000000000000000 q30;ac5 DP=332;AC=1;AF=0.0030 hxb2_pol 654 . c t 2.000000000000000000000000 q30;ac5 DP=346;AC=1;AF=0.0029 hxb2_pol 656 . t a 2.000000000000000000000000 q30;ac5 DP=354;AC=1;AF=0.0028 hxb2_pol 660 . t a 2.000000000000000000000000 q30;ac5 DP=372;AC=1;AF=0.0027 hxb2_pol 661 . g t 2.000000000000000000000000 q30;ac5 DP=376;AC=1;AF=0.0027 hxb2_pol 662 . a g 2.000000000000000000000000 q30;ac5 DP=377;AC=1;AF=0.0027 hxb2_pol 664 . g a 7.000000000000000000000000 q30;ac5 DP=383;AC=2;AF=0.0052 hxb2_pol 665 . a g 7.000000000000000000000000 q30;ac5 DP=384;AC=2;AF=0.0052 hxb2_pol 666 . c a 2.000000000000000000000000 q30;ac5 DP=388;AC=1;AF=0.0026 hxb2_pol 666 . c t 2.000000000000000000000000 q30;ac5 DP=388;AC=1;AF=0.0026 hxb2_pol 667 . t c 2.000000000000000000000000 q30;ac5 DP=387;AC=1;AF=0.0026 hxb2_pol 669 . c t 6.000000000000000000000000 q30;ac5 DP=396;AC=2;AF=0.0051 hxb2_pol 670 . a c 6.000000000000000000000000 q30;ac5 DP=398;AC=2;AF=0.0050 hxb2_pol 671 . g a 6.000000000000000000000000 q30;ac5 DP=399;AC=2;AF=0.0050 hxb2_pol 673 . a g 2.000000000000000000000000 q30;ac5 DP=404;AC=1;AF=0.0025 hxb2_pol 680 . c t 2.000000000000000000000000 q30;ac5 DP=421;AC=1;AF=0.0024 hxb2_pol 681 . t g 2.000000000000000000000000 q30;ac5 DP=425;AC=1;AF=0.0024 hxb2_pol 682 . g t 2.000000000000000000000000 q30;ac5 DP=426;AC=1;AF=0.0023 hxb2_pol 683 . c a 2.000000000000000000000000 q30;ac5 DP=430;AC=1;AF=0.0023 hxb2_pol 683 . c g 6.000000000000000000000000 q30;ac5 DP=430;AC=2;AF=0.0047 hxb2_pol 684 . a c 6.000000000000000000000000 q30;ac5 DP=430;AC=2;AF=0.0047 hxb2_pol 685 . t a 12.00000000000000000000000 q30;ac5 DP=420;AC=3;AF=0.0071 hxb2_pol 687 . t a 2.000000000000000000000000 q30;ac5 DP=436;AC=1;AF=0.0023 hxb2_pol 688 . a c 6.000000000000000000000000 q30;ac5 DP=436;AC=2;AF=0.0046 hxb2_pol 690 . c a 2.000000000000000000000000 q30;ac5 DP=440;AC=1;AF=0.0023 hxb2_pol 691 . a c 2.000000000000000000000000 q30;ac5 DP=440;AC=1;AF=0.0023 hxb2_pol 691 . a t 6.000000000000000000000000 q30;ac5 DP=440;AC=2;AF=0.0045 hxb2_pol 692 . t a 11.00000000000000000000000 q30;ac5 DP=443;AC=3;AF=0.0068 hxb2_pol 693 . a c 2.000000000000000000000000 q30;ac5 DP=446;AC=1;AF=0.0022 hxb2_pol 693 . a t 2.000000000000000000000000 q30;ac5 DP=446;AC=1;AF=0.0022 hxb2_pol 694 . c a 2.000000000000000000000000 q30;ac5 DP=450;AC=1;AF=0.0022 hxb2_pol 695 . c t 2.000000000000000000000000 q30;ac5 DP=457;AC=1;AF=0.0022 hxb2_pol 696 . t c 2.000000000000000000000000 q30;ac5 DP=457;AC=1;AF=0.0022 hxb2_pol 697 . a t 11.00000000000000000000000 q30;ac5 DP=457;AC=3;AF=0.0066 hxb2_pol 698 . g a 11.00000000000000000000000 q30;ac5 DP=459;AC=3;AF=0.0065 hxb2_pol 699 . t g 11.00000000000000000000000 q30;ac5 DP=460;AC=3;AF=0.0065 hxb2_pol 700 . a t 11.00000000000000000000000 q30;ac5 DP=464;AC=3;AF=0.0065 hxb2_pol 701 . t a 24.00000000000000000000000 q30 DP=465;AC=5;AF=0.0108 hxb2_pol 702 . a t 17.00000000000000000000000 q30;ac5 DP=461;AC=4;AF=0.0087 hxb2_pol 704 . a c 1.000000000000000000000000 q30;ac5 DP=475;AC=1;AF=0.0021 hxb2_pol 705 . c a 10.00000000000000000000000 q30;ac5 DP=476;AC=3;AF=0.0063 hxb2_pol 706 . a c 2.000000000000000000000000 q30;ac5 DP=474;AC=1;AF=0.0021 hxb2_pol 707 . a t 5.000000000000000000000000 q30;ac5 DP=480;AC=2;AF=0.0042 hxb2_pol 708 . t g 5.000000000000000000000000 q30;ac5 DP=482;AC=2;AF=0.0041 hxb2_pol 710 . a g 1.000000000000000000000000 q30;ac5 DP=486;AC=1;AF=0.0021 hxb2_pol 711 . g a 1.000000000000000000000000 q30;ac5 DP=487;AC=1;AF=0.0021 hxb2_pol 712 . a c 5.000000000000000000000000 q30;ac5 DP=489;AC=2;AF=0.0041 hxb2_pol 713 . c a 5.000000000000000000000000 q30;ac5 DP=488;AC=2;AF=0.0041 hxb2_pol 714 . a c 10.00000000000000000000000 q30;ac5 DP=490;AC=3;AF=0.0061 hxb2_pol 716 . c a 16.00000000000000000000000 q30;ac5 DP=494;AC=4;AF=0.0081 hxb2_pol 717 . a g 16.00000000000000000000000 q30;ac5 DP=497;AC=4;AF=0.0080 hxb2_pol 720 . g a 10.00000000000000000000000 q30;ac5 DP=504;AC=3;AF=0.0060 hxb2_pol 721 . a t 5.000000000000000000000000 q30;ac5 DP=504;AC=2;AF=0.0040 hxb2_pol 722 . t a 1.000000000000000000000000 q30;ac5 DP=504;AC=1;AF=0.0020 hxb2_pol 723 . t a 1.000000000000000000000000 q30;ac5 DP=509;AC=1;AF=0.0020 hxb2_pol 724 . a g 1.000000000000000000000000 q30;ac5 DP=508;AC=1;AF=0.0020 hxb2_pol 725 . g a 1.000000000000000000000000 q30;ac5 DP=511;AC=1;AF=0.0020 hxb2_pol 726 . a t 1.000000000000000000000000 q30;ac5 DP=514;AC=1;AF=0.0019 hxb2_pol 744 . t c 5.000000000000000000000000 q30;ac5 DP=540;AC=2;AF=0.0037 hxb2_pol 745 . c a 1.000000000000000000000000 q30;ac5 DP=535;AC=1;AF=0.0019 hxb2_pol 745 . c t 5.000000000000000000000000 q30;ac5 DP=535;AC=2;AF=0.0037 hxb2_pol 746 . c a 4.000000000000000000000000 q30;ac5 DP=545;AC=2;AF=0.0037 hxb2_pol 747 . a c 29.00000000000000000000000 q30 DP=544;AC=6;AF=0.0110 hxb2_pol 748 . c a 15.00000000000000000000000 q30;ac5 DP=544;AC=4;AF=0.0074 hxb2_pol 749 . a c 4.000000000000000000000000 q30;ac5 DP=547;AC=2;AF=0.0037 hxb2_pol 749 . a g 4.000000000000000000000000 q30;ac5 DP=547;AC=2;AF=0.0037 hxb2_pol 750 . g a 9.000000000000000000000000 q30;ac5 DP=536;AC=3;AF=0.0056 hxb2_pol 752 . g a 9.000000000000000000000000 q30;ac5 DP=550;AC=3;AF=0.0055 hxb2_pol 753 . a g 1.000000000000000000000000 q30;ac5 DP=551;AC=1;AF=0.0018 hxb2_pol 753 . a t 9.000000000000000000000000 q30;ac5 DP=551;AC=3;AF=0.0054 hxb2_pol 754 . t a 9.000000000000000000000000 q30;ac5 DP=554;AC=3;AF=0.0054 hxb2_pol 754 . t g 4.000000000000000000000000 q30;ac5 DP=554;AC=2;AF=0.0036 hxb2_pol 755 . g t 15.00000000000000000000000 q30;ac5 DP=552;AC=4;AF=0.0072 hxb2_pol 756 . g a 1.000000000000000000000000 q30;ac5 DP=558;AC=1;AF=0.0018 hxb2_pol 757 . a g 1.000000000000000000000000 q30;ac5 DP=550;AC=1;AF=0.0018 hxb2_pol 759 . a g 1.000000000000000000000000 q30;ac5 DP=564;AC=1;AF=0.0018 hxb2_pol 760 . g a 4.000000000000000000000000 q30;ac5 DP=564;AC=2;AF=0.0035 hxb2_pol 762 . a g 1.000000000000000000000000 q30;ac5 DP=573;AC=1;AF=0.0017 hxb2_pol 763 . t a 1.000000000000000000000000 q30;ac5 DP=576;AC=1;AF=0.0017 hxb2_pol 764 . c t 1.000000000000000000000000 q30;ac5 DP=577;AC=1;AF=0.0017 hxb2_pol 765 . a c 1.000000000000000000000000 q30;ac5 DP=582;AC=1;AF=0.0017 hxb2_pol 766 . c a 1.000000000000000000000000 q30;ac5 DP=582;AC=1;AF=0.0017 hxb2_pol 772 . a t 4.000000000000000000000000 q30;ac5 DP=597;AC=2;AF=0.0034 hxb2_pol 773 . t a 8.000000000000000000000000 q30;ac5 DP=597;AC=3;AF=0.0050 hxb2_pol 774 . a t 4.000000000000000000000000 q30;ac5 DP=601;AC=2;AF=0.0033 hxb2_pol 775 . t a 1.000000000000000000000000 q30;ac5 DP=598;AC=1;AF=0.0017 hxb2_pol 776 . t c 1.000000000000000000000000 q30;ac5 DP=601;AC=1;AF=0.0017 hxb2_pol 777 . c t 1.000000000000000000000000 q30;ac5 DP=592;AC=1;AF=0.0017 hxb2_pol 778 . c a 4.000000000000000000000000 q30;ac5 DP=603;AC=2;AF=0.0033 hxb2_pol 779 . a c 4.000000000000000000000000 q30;ac5 DP=588;AC=2;AF=0.0034 hxb2_pol 782 . g a 1.000000000000000000000000 q30;ac5 DP=605;AC=1;AF=0.0017 hxb2_pol 791 . c a 1.000000000000000000000000 q30;ac5 DP=617;AC=1;AF=0.0016 hxb2_pol 792 . a c 1.000000000000000000000000 q30;ac5 DP=570;AC=1;AF=0.0018 hxb2_pol 796 . a t 13.00000000000000000000000 q30;ac5 DP=621;AC=4;AF=0.0064 hxb2_pol 797 . t c 13.00000000000000000000000 q30;ac5 DP=620;AC=4;AF=0.0065 hxb2_pol 798 . c t 19.00000000000000000000000 q30 DP=620;AC=5;AF=0.0081 hxb2_pol 799 . t c 1.000000000000000000000000 q30;ac5 DP=618;AC=1;AF=0.0016 hxb2_pol 800 . t a 4.000000000000000000000000 q30;ac5 DP=632;AC=2;AF=0.0032 hxb2_pol 801 . a g 1.000000000000000000000000 q30;ac5 DP=636;AC=1;AF=0.0016 hxb2_pol 802 . g a 1.000000000000000000000000 q30;ac5 DP=641;AC=1;AF=0.0016 hxb2_pol 803 . a g 1.000000000000000000000000 q30;ac5 DP=644;AC=1;AF=0.0016 hxb2_pol 804 . g c 1.000000000000000000000000 q30;ac5 DP=649;AC=1;AF=0.0015 hxb2_pol 806 . c t 1.000000000000000000000000 q30;ac5 DP=653;AC=1;AF=0.0015 hxb2_pol 807 . t c 8.000000000000000000000000 q30;ac5 DP=625;AC=3;AF=0.0048 hxb2_pol 810 . t a 19.00000000000000000000000 q30 DP=635;AC=5;AF=0.0079 hxb2_pol 811 . a g 19.00000000000000000000000 q30 DP=634;AC=5;AF=0.0079 hxb2_pol 811 . a t 13.00000000000000000000000 q30;ac5 DP=634;AC=4;AF=0.0063 hxb2_pol 812 . g a 58.00000000000000000000000 PASS DP=634;AC=10;AF=0.0158 hxb2_pol 813 . a g 20.00000000000000000000000 q30 DP=609;AC=5;AF=0.0082 hxb2_pol 816 . a c 18.00000000000000000000000 q30 DP=652;AC=5;AF=0.0077 hxb2_pol 817 . c a 40.00000000000000000000000 PASS DP=655;AC=8;AF=0.0122 hxb2_pol 818 . a c 19.00000000000000000000000 q30 DP=642;AC=5;AF=0.0078 hxb2_pol 821 . a t 12.00000000000000000000000 q30;ac5 DP=698;AC=4;AF=0.0057 hxb2_pol 822 . t c 6.000000000000000000000000 q30;ac5 DP=748;AC=3;AF=0.0040 hxb2_pol 830 . t a 2.000000000000000000000000 q30;ac5 DP=868;AC=2;AF=0.0023 hxb2_pol 834 . t a 2.000000000000000000000000 q30;ac5 DP=890;AC=2;AF=0.0022 hxb2_pol 835 . a t 2.000000000000000000000000 q30;ac5 DP=891;AC=2;AF=0.0022 hxb2_pol 837 . c t 2.000000000000000000000000 q30;ac5 DP=895;AC=2;AF=0.0022 hxb2_pol 839 . a t 5.000000000000000000000000 q30;ac5 DP=896;AC=3;AF=0.0033 hxb2_pol 840 . t c 2.000000000000000000000000 q30;ac5 DP=905;AC=2;AF=0.0022 hxb2_pol 841 . c a 2.000000000000000000000000 q30;ac5 DP=911;AC=2;AF=0.0022 hxb2_pol 844 . t a 2.000000000000000000000000 q30;ac5 DP=921;AC=2;AF=0.0022 hxb2_pol 853 . g t 2.000000000000000000000000 q30;ac5 DP=945;AC=2;AF=0.0021 hxb2_pol 854 . a g 2.000000000000000000000000 q30;ac5 DP=951;AC=2;AF=0.0021 hxb2_pol 855 . t a 2.000000000000000000000000 q30;ac5 DP=939;AC=2;AF=0.0021 hxb2_pol 858 . g t 2.000000000000000000000000 q30;ac5 DP=967;AC=2;AF=0.0021 hxb2_pol 874 . t c 2.000000000000000000000000 q30;ac5 DP=989;AC=2;AF=0.0020 hxb2_pol 875 . t a 4.000000000000000000000000 q30;ac5 DP=1002;AC=3;AF=0.0030 hxb2_pol 876 . a g 4.000000000000000000000000 q30;ac5 DP=1003;AC=3;AF=0.0030 hxb2_pol 876 . a t 4.000000000000000000000000 q30;ac5 DP=1003;AC=3;AF=0.0030 hxb2_pol 877 . g a 16.00000000000000000000000 q30 DP=1003;AC=6;AF=0.0060 hxb2_pol 878 . a g 8.000000000000000000000000 q30;ac5 DP=987;AC=4;AF=0.0041 hxb2_pol 881 . t a 4.000000000000000000000000 q30;ac5 DP=1011;AC=3;AF=0.0030 hxb2_pol 882 . a t 4.000000000000000000000000 q30;ac5 DP=1011;AC=3;AF=0.0030 hxb2_pol 883 . g a 2.000000000000000000000000 q30;ac5 DP=988;AC=2;AF=0.0020 hxb2_pol 891 . t a 1.000000000000000000000000 q30;ac5 DP=1022;AC=2;AF=0.0020 hxb2_pol 892 . a g 1.000000000000000000000000 q30;ac5 DP=1020;AC=2;AF=0.0020 hxb2_pol 893 . g a 7.000000000000000000000000 q30;ac5 DP=1017;AC=4;AF=0.0039 hxb2_pol 894 . a g 2.000000000000000000000000 q30;ac5 DP=1000;AC=2;AF=0.0020 hxb2_pol 895 . a c 7.000000000000000000000000 q30;ac5 DP=1008;AC=4;AF=0.0040 hxb2_pol 896 . c a 28.00000000000000000000000 q30 DP=1006;AC=8;AF=0.0080 hxb2_pol 897 . a c 18.00000000000000000000000 q30 DP=918;AC=6;AF=0.0065 hxb2_pol 901 . a t 7.000000000000000000000000 q30;ac5 DP=1020;AC=4;AF=0.0039 hxb2_pol 902 . t a 16.00000000000000000000000 q30 DP=1026;AC=6;AF=0.0058 hxb2_pol 903 . a g 7.000000000000000000000000 q30;ac5 DP=1043;AC=4;AF=0.0038 hxb2_pol 903 . a t 1.000000000000000000000000 q30;ac5 DP=1043;AC=2;AF=0.0019 hxb2_pol 904 . g a 4.000000000000000000000000 q30;ac5 DP=1054;AC=3;AF=0.0028 hxb2_pol 905 . a g 4.000000000000000000000000 q30;ac5 DP=1062;AC=3;AF=0.0028 hxb2_pol 913 . a g 1.000000000000000000000000 q30;ac5 DP=1099;AC=2;AF=0.0018 hxb2_pol 914 . g a 1.000000000000000000000000 q30;ac5 DP=1099;AC=2;AF=0.0018 hxb2_pol 924 . g t 1.000000000000000000000000 q30;ac5 DP=1120;AC=2;AF=0.0018 hxb2_pol 925 . t g 1.000000000000000000000000 q30;ac5 DP=1116;AC=2;AF=0.0018 hxb2_pol 926 . t g 3.000000000000000000000000 q30;ac5 DP=1131;AC=3;AF=0.0027 hxb2_pol 927 . g a 6.000000000000000000000000 q30;ac5 DP=1132;AC=4;AF=0.0035 hxb2_pol 927 . g t 3.000000000000000000000000 q30;ac5 DP=1132;AC=3;AF=0.0027 hxb2_pol 928 . a g 25.00000000000000000000000 q30 DP=1131;AC=8;AF=0.0071 hxb2_pol 929 . g a 3.000000000000000000000000 q30;ac5 DP=1120;AC=3;AF=0.0027 hxb2_pol 930 . g t 14.00000000000000000000000 q30 DP=1134;AC=6;AF=0.0053 hxb2_pol 931 . t g 37.00000000000000000000000 PASS DP=1132;AC=10;AF=0.0088 hxb2_pol 932 . g t 10.00000000000000000000000 q30 DP=1078;AC=5;AF=0.0046 hxb2_pol 935 . g a 3.000000000000000000000000 q30;ac5 DP=1141;AC=3;AF=0.0026 hxb2_pol 936 . a c 3.000000000000000000000000 q30;ac5 DP=1140;AC=3;AF=0.0026 hxb2_pol 936 . a g 6.000000000000000000000000 q30;ac5 DP=1140;AC=4;AF=0.0035 hxb2_pol 937 . c a 3.000000000000000000000000 q30;ac5 DP=1138;AC=3;AF=0.0026 hxb2_pol 937 . c t 3.000000000000000000000000 q30;ac5 DP=1138;AC=3;AF=0.0026 hxb2_pol 938 . t c 3.000000000000000000000000 q30;ac5 DP=1136;AC=3;AF=0.0026 hxb2_pol 940 . a t 6.000000000000000000000000 q30;ac5 DP=1148;AC=4;AF=0.0035 hxb2_pol 941 . c a 14.00000000000000000000000 q30 DP=1149;AC=6;AF=0.0052 hxb2_pol 946 . c a 3.000000000000000000000000 q30;ac5 DP=1146;AC=3;AF=0.0026 hxb2_pol 948 . a c 6.000000000000000000000000 q30;ac5 DP=1156;AC=4;AF=0.0035 hxb2_pol 949 . g a 6.000000000000000000000000 q30;ac5 DP=1131;AC=4;AF=0.0035 hxb2_pol 950 . a g 6.000000000000000000000000 q30;ac5 DP=1101;AC=4;AF=0.0036 hxb2_pol 951 . c a 6.000000000000000000000000 q30;ac5 DP=1093;AC=4;AF=0.0037 hxb2_pol 952 . a c 8.000000000000000000000000 q30;ac5 DP=967;AC=4;AF=0.0041 hxb2_pol 957 . a c 15.00000000000000000000000 q30 DP=1105;AC=6;AF=0.0054 hxb2_pol 958 . c a 10.00000000000000000000000 q30 DP=1110;AC=5;AF=0.0045 hxb2_pol 959 . a t 10.00000000000000000000000 q30 DP=1123;AC=5;AF=0.0045 hxb2_pol 960 . t c 6.000000000000000000000000 q30;ac5 DP=1155;AC=4;AF=0.0035 hxb2_pol 961 . c a 3.000000000000000000000000 q30;ac5 DP=1198;AC=3;AF=0.0025 hxb2_pol 962 . a g 3.000000000000000000000000 q30;ac5 DP=1214;AC=3;AF=0.0025 hxb2_pol 963 . g a 3.000000000000000000000000 q30;ac5 DP=1217;AC=3;AF=0.0025 hxb2_pol 966 . a g 3.000000000000000000000000 q30;ac5 DP=1237;AC=3;AF=0.0024 hxb2_pol 967 . g a 9.000000000000000000000000 q30 DP=1239;AC=5;AF=0.0040 hxb2_pol 968 . a g 1.000000000000000000000000 q30;ac5 DP=1239;AC=2;AF=0.0016 hxb2_pol 969 . a c 5.000000000000000000000000 q30;ac5 DP=1251;AC=4;AF=0.0032 hxb2_pol 970 . c a 8.000000000000000000000000 q30 DP=1255;AC=5;AF=0.0040 hxb2_pol 971 . c t 3.000000000000000000000000 q30;ac5 DP=1268;AC=3;AF=0.0024 hxb2_pol 972 . t c 27.00000000000000000000000 q30 DP=1270;AC=9;AF=0.0071 hxb2_pol 973 . c t 12.00000000000000000000000 q30 DP=1268;AC=6;AF=0.0047 hxb2_pol 974 . c a 16.00000000000000000000000 q30 DP=1279;AC=7;AF=0.0055 hxb2_pol 975 . a c 8.000000000000000000000000 q30 DP=1282;AC=5;AF=0.0039 hxb2_pol 975 . a t 16.00000000000000000000000 q30 DP=1282;AC=7;AF=0.0055 hxb2_pol 976 . t a 12.00000000000000000000000 q30 DP=1274;AC=6;AF=0.0047 hxb2_pol 977 . t c 27.00000000000000000000000 q30 DP=1287;AC=9;AF=0.0070 hxb2_pol 978 . c t 5.000000000000000000000000 q30;ac5 DP=1275;AC=4;AF=0.0031 hxb2_pol 979 . c t 21.00000000000000000000000 q30 DP=1290;AC=8;AF=0.0062 hxb2_pol 980 . t c 12.00000000000000000000000 q30 DP=1262;AC=6;AF=0.0048 hxb2_pol 982 . t g 16.00000000000000000000000 q30 DP=1295;AC=7;AF=0.0054 hxb2_pol 983 . g t 2.000000000000000000000000 q30;ac5 DP=1284;AC=3;AF=0.0023 hxb2_pol 984 . g a 8.000000000000000000000000 q30 DP=1312;AC=5;AF=0.0038 hxb2_pol 985 . a g 2.000000000000000000000000 q30;ac5 DP=1316;AC=3;AF=0.0023 hxb2_pol 985 . a t 8.000000000000000000000000 q30 DP=1316;AC=5;AF=0.0038 hxb2_pol 986 . t a 2.000000000000000000000000 q30;ac5 DP=1320;AC=3;AF=0.0023 hxb2_pol 986 . t g 5.000000000000000000000000 q30;ac5 DP=1320;AC=4;AF=0.0030 hxb2_pol 987 . g t 2.000000000000000000000000 q30;ac5 DP=1296;AC=3;AF=0.0023 hxb2_pol 989 . g t 2.000000000000000000000000 q30;ac5 DP=1334;AC=3;AF=0.0022 hxb2_pol 990 . t g 5.000000000000000000000000 q30;ac5 DP=1324;AC=4;AF=0.0030 hxb2_pol 991 . t a 2.000000000000000000000000 q30;ac5 DP=1347;AC=3;AF=0.0022 hxb2_pol 992 . a t 15.00000000000000000000000 q30 DP=1351;AC=7;AF=0.0052 hxb2_pol 993 . t a 2.000000000000000000000000 q30;ac5 DP=1357;AC=3;AF=0.0022 hxb2_pol 993 . t g 1.000000000000000000000000 q30;ac5 DP=1357;AC=2;AF=0.0015 hxb2_pol 994 . g a 1.000000000000000000000000 q30;ac5 DP=1361;AC=2;AF=0.0015 hxb2_pol 994 . g t 2.000000000000000000000000 q30;ac5 DP=1361;AC=3;AF=0.0022 hxb2_pol 995 . a g 2.000000000000000000000000 q30;ac5 DP=1343;AC=3;AF=0.0022 hxb2_pol 997 . c a 1.000000000000000000000000 q30;ac5 DP=1366;AC=2;AF=0.0015 hxb2_pol 998 . t c 1.000000000000000000000000 q30;ac5 DP=1370;AC=2;AF=0.0015 hxb2_pol 999 . c t 1.000000000000000000000000 q30;ac5 DP=1365;AC=2;AF=0.0015 hxb2_pol 1002 . t a 1.000000000000000000000000 q30;ac5 DP=1380;AC=2;AF=0.0014 hxb2_pol 1003 . c t 1.000000000000000000000000 q30;ac5 DP=1366;AC=2;AF=0.0015 hxb2_pol 1004 . c t 1.000000000000000000000000 q30;ac5 DP=1391;AC=2;AF=0.0014 hxb2_pol 1005 . t g 1.000000000000000000000000 q30;ac5 DP=1393;AC=2;AF=0.0014 hxb2_pol 1006 . g a 1.000000000000000000000000 q30;ac5 DP=1395;AC=2;AF=0.0014 hxb2_pol 1007 . a t 1.000000000000000000000000 q30;ac5 DP=1394;AC=2;AF=0.0014 hxb2_pol 1008 . t a 7.000000000000000000000000 q30 DP=1393;AC=5;AF=0.0036 hxb2_pol 1009 . a t 1.000000000000000000000000 q30;ac5 DP=1358;AC=2;AF=0.0015 hxb2_pol 1013 . g t 4.000000000000000000000000 q30;ac5 DP=1395;AC=4;AF=0.0029 hxb2_pol 1014 . g a 2.000000000000000000000000 q30;ac5 DP=1401;AC=3;AF=0.0021 hxb2_pol 1015 . a c 4.000000000000000000000000 q30;ac5 DP=1401;AC=4;AF=0.0029 hxb2_pol 1015 . a g 1.000000000000000000000000 q30;ac5 DP=1401;AC=2;AF=0.0014 hxb2_pol 1016 . c a 15.00000000000000000000000 q30 DP=1409;AC=7;AF=0.0050 hxb2_pol 1017 . a g 4.000000000000000000000000 q30;ac5 DP=1414;AC=4;AF=0.0028 hxb2_pol 1018 . g t 2.000000000000000000000000 q30;ac5 DP=1411;AC=3;AF=0.0021 hxb2_pol 1027 . a t 4.000000000000000000000000 q30;ac5 DP=1426;AC=4;AF=0.0028 hxb2_pol 1028 . t a 2.000000000000000000000000 q30;ac5 DP=1427;AC=3;AF=0.0021 hxb2_pol 1031 . t g 4.000000000000000000000000 q30;ac5 DP=1428;AC=4;AF=0.0028 hxb2_pol 1033 . c g 2.000000000000000000000000 q30;ac5 DP=1434;AC=3;AF=0.0021 hxb2_pol 1035 . g t 4.000000000000000000000000 q30;ac5 DP=1427;AC=4;AF=0.0028 hxb2_pol 1036 . c g 7.000000000000000000000000 q30 DP=1397;AC=5;AF=0.0036 hxb2_pol 1037 . c a 1.000000000000000000000000 q30;ac5 DP=1393;AC=2;AF=0.0014 hxb2_pol 1038 . a c 19.00000000000000000000000 q30 DP=1393;AC=8;AF=0.0057 hxb2_pol 1038 . a g 2.000000000000000000000000 q30;ac5 DP=1393;AC=3;AF=0.0022 hxb2_pol 1039 . g a 55.00000000000000000000000 PASS DP=1394;AC=14;AF=0.0100 hxb2_pol 1040 . a g 46.00000000000000000000000 PASS DP=1277;AC=12;AF=0.0094 hxb2_pol 1047 . c a 2.000000000000000000000000 q30;ac5 DP=1439;AC=3;AF=0.0021 hxb2_pol 1054 . a g 2.000000000000000000000000 q30;ac5 DP=1457;AC=3;AF=0.0021 hxb2_pol 1055 . c a 2.000000000000000000000000 q30;ac5 DP=1457;AC=3;AF=0.0021 hxb2_pol 1056 . t c 2.000000000000000000000000 q30;ac5 DP=1461;AC=3;AF=0.0021 hxb2_pol 1057 . g t 2.000000000000000000000000 q30;ac5 DP=1460;AC=3;AF=0.0021 hxb2_pol 1059 . c t 2.000000000000000000000000 q30;ac5 DP=1468;AC=3;AF=0.0020 hxb2_pol 1072 . a g 2.000000000000000000000000 q30;ac5 DP=1448;AC=3;AF=0.0021 hxb2_pol 1074 . g a 2.000000000000000000000000 q30;ac5 DP=1459;AC=3;AF=0.0021 hxb2_pol 1075 . t g 4.000000000000000000000000 q30;ac5 DP=1452;AC=4;AF=0.0028 hxb2_pol 1077 . a t 4.000000000000000000000000 q30;ac5 DP=1438;AC=4;AF=0.0028 hxb2_pol 1078 . g a 2.000000000000000000000000 q30;ac5 DP=1429;AC=3;AF=0.0021 hxb2_pol 1078 . g t 2.000000000000000000000000 q30;ac5 DP=1429;AC=3;AF=0.0021 hxb2_pol 1079 . t g 10.00000000000000000000000 q30 DP=1410;AC=6;AF=0.0043 hxb2_pol 1080 . g t 5.000000000000000000000000 q30;ac5 DP=1329;AC=4;AF=0.0030 hxb2_pol 1083 . g a 1.000000000000000000000000 q30;ac5 DP=1379;AC=2;AF=0.0015 hxb2_pol 1084 . a g 20.00000000000000000000000 q30 DP=1357;AC=8;AF=0.0059 hxb2_pol 1086 . a t 1.000000000000000000000000 q30;ac5 DP=1390;AC=2;AF=0.0014 hxb2_pol 1087 . t a 7.000000000000000000000000 q30 DP=1376;AC=5;AF=0.0036 hxb2_pol 1088 . t g 2.000000000000000000000000 q30;ac5 DP=1403;AC=3;AF=0.0021 hxb2_pol 1089 . g a 2.000000000000000000000000 q30;ac5 DP=1418;AC=3;AF=0.0021 hxb2_pol 1091 . a t 2.000000000000000000000000 q30;ac5 DP=1441;AC=3;AF=0.0021 hxb2_pol 1097 . c g 2.000000000000000000000000 q30;ac5 DP=1457;AC=3;AF=0.0021 hxb2_pol 1098 . a c 7.000000000000000000000000 q30 DP=1448;AC=5;AF=0.0035 hxb2_pol 1099 . a g 2.000000000000000000000000 q30;ac5 DP=1469;AC=3;AF=0.0020 hxb2_pol 1100 . g t 2.000000000000000000000000 q30;ac5 DP=1473;AC=3;AF=0.0020 hxb2_pol 1101 . t c 2.000000000000000000000000 q30;ac5 DP=1470;AC=3;AF=0.0020 hxb2_pol 1102 . c a 2.000000000000000000000000 q30;ac5 DP=1475;AC=3;AF=0.0020 hxb2_pol 1104 . g a 4.000000000000000000000000 q30;ac5 DP=1475;AC=4;AF=0.0027 hxb2_pol 1108 . t a 4.000000000000000000000000 q30;ac5 DP=1476;AC=4;AF=0.0027 hxb2_pol 1109 . a c 4.000000000000000000000000 q30;ac5 DP=1479;AC=4;AF=0.0027 hxb2_pol 1109 . a t 2.000000000000000000000000 q30;ac5 DP=1479;AC=3;AF=0.0020 hxb2_pol 1110 . c a 7.000000000000000000000000 q30 DP=1453;AC=5;AF=0.0034 hxb2_pol 1112 . c a 28.00000000000000000000000 q30 DP=1484;AC=10;AF=0.0067 hxb2_pol 1113 . a c 10.00000000000000000000000 q30 DP=1485;AC=6;AF=0.0040 hxb2_pol 1113 . a g 33.00000000000000000000000 PASS DP=1485;AC=11;AF=0.0074 hxb2_pol 1114 . g a 14.00000000000000000000000 q30 DP=1456;AC=7;AF=0.0048 hxb2_pol 1116 . g a 10.00000000000000000000000 q30 DP=1498;AC=6;AF=0.0040 hxb2_pol 1117 . a g 22.00000000000000000000000 q30 DP=1499;AC=9;AF=0.0060 hxb2_pol 1117 . a t 13.00000000000000000000000 q30 DP=1499;AC=7;AF=0.0047 hxb2_pol 1118 . t a 33.00000000000000000000000 PASS DP=1492;AC=11;AF=0.0074 hxb2_pol 1119 . t a 13.00000000000000000000000 q30 DP=1507;AC=7;AF=0.0046 hxb2_pol 1120 . a t 28.00000000000000000000000 q30 DP=1474;AC=10;AF=0.0068 hxb2_pol 1122 . a g 4.000000000000000000000000 q30;ac5 DP=1516;AC=4;AF=0.0026 hxb2_pol 1123 . g a 17.00000000000000000000000 q30 DP=1528;AC=8;AF=0.0052 hxb2_pol 1123 . g t 3.000000000000000000000000 q30;ac5 DP=1528;AC=4;AF=0.0026 hxb2_pol 1124 . t g 13.00000000000000000000000 q30 DP=1530;AC=7;AF=0.0046 hxb2_pol 1125 . a t 13.00000000000000000000000 q30 DP=1526;AC=7;AF=0.0046 hxb2_pol 1127 . g a 9.000000000000000000000000 q30 DP=1522;AC=6;AF=0.0039 hxb2_pol 1129 . c g 3.000000000000000000000000 q30;ac5 DP=1551;AC=4;AF=0.0026 hxb2_pol 1130 . a c 3.000000000000000000000000 q30;ac5 DP=1537;AC=4;AF=0.0026 hxb2_pol 1131 . a t 1.000000000000000000000000 q30;ac5 DP=1552;AC=3;AF=0.0019 hxb2_pol 1132 . t a 3.000000000000000000000000 q30;ac5 DP=1534;AC=4;AF=0.0026 hxb2_pol 1134 . a t 1.000000000000000000000000 q30;ac5 DP=1555;AC=3;AF=0.0019 hxb2_pol 1136 . g t 6.000000000000000000000000 q30 DP=1554;AC=5;AF=0.0032 hxb2_pol 1141 . c a 1.000000000000000000000000 q30;ac5 DP=1550;AC=3;AF=0.0019 hxb2_pol 1141 . c t 1.000000000000000000000000 q30;ac5 DP=1550;AC=3;AF=0.0019 hxb2_pol 1142 . t c 13.00000000000000000000000 q30 DP=1554;AC=7;AF=0.0045 hxb2_pol 1143 . c t 2.000000000000000000000000 q30;ac5 DP=1547;AC=3;AF=0.0019 hxb2_pol 1144 . c t 1.000000000000000000000000 q30;ac5 DP=1556;AC=3;AF=0.0019 hxb2_pol 1145 . t c 2.000000000000000000000000 q30;ac5 DP=1538;AC=3;AF=0.0020 hxb2_pol 1146 . t a 13.00000000000000000000000 q30 DP=1558;AC=7;AF=0.0045 hxb2_pol 1147 . a g 17.00000000000000000000000 q30 DP=1558;AC=8;AF=0.0051 hxb2_pol 1148 . g a 26.00000000000000000000000 q30 DP=1555;AC=10;AF=0.0064 hxb2_pol 1149 . a g 26.00000000000000000000000 q30 DP=1557;AC=10;AF=0.0064 hxb2_pol 1150 . g a 6.000000000000000000000000 q30 DP=1544;AC=5;AF=0.0032 hxb2_pol 1151 . g a 9.000000000000000000000000 q30 DP=1555;AC=6;AF=0.0039 hxb2_pol 1152 . a g 17.00000000000000000000000 q30 DP=1538;AC=8;AF=0.0052 hxb2_pol 1153 . a c 13.00000000000000000000000 q30 DP=1552;AC=7;AF=0.0045 hxb2_pol 1154 . c a 22.00000000000000000000000 q30 DP=1540;AC=9;AF=0.0058 hxb2_pol 1155 . c a 13.00000000000000000000000 q30 DP=1547;AC=7;AF=0.0045 hxb2_pol 1156 . a c 22.00000000000000000000000 q30 DP=1518;AC=9;AF=0.0059 hxb2_pol 1158 . a g 1.000000000000000000000000 q30;ac5 DP=1552;AC=3;AF=0.0019 hxb2_pol 1159 . g a 1.000000000000000000000000 q30;ac5 DP=1555;AC=3;AF=0.0019 hxb2_pol 1160 . c g 1.000000000000000000000000 q30;ac5 DP=1564;AC=3;AF=0.0019 hxb2_pol 1161 . a c 6.000000000000000000000000 q30 DP=1566;AC=5;AF=0.0032 hxb2_pol 1166 . c a 9.000000000000000000000000 q30 DP=1567;AC=6;AF=0.0038 hxb2_pol 1168 . g a 3.000000000000000000000000 q30;ac5 DP=1573;AC=4;AF=0.0025 hxb2_pol 1169 . a g 1.000000000000000000000000 q30;ac5 DP=1556;AC=3;AF=0.0019 hxb2_pol 1171 . g a 3.000000000000000000000000 q30;ac5 DP=1581;AC=4;AF=0.0025 hxb2_pol 1172 . t g 6.000000000000000000000000 q30 DP=1576;AC=5;AF=0.0032 hxb2_pol 1173 . a t 1.000000000000000000000000 q30;ac5 DP=1554;AC=3;AF=0.0019 hxb2_pol 1175 . t a 3.000000000000000000000000 q30;ac5 DP=1577;AC=4;AF=0.0025 hxb2_pol 1176 . a c 6.000000000000000000000000 q30 DP=1577;AC=5;AF=0.0032 hxb2_pol 1184 . c a 3.000000000000000000000000 q30;ac5 DP=1583;AC=4;AF=0.0025 hxb2_pol 1185 . a g 1.000000000000000000000000 q30;ac5 DP=1589;AC=3;AF=0.0019 hxb2_pol 1186 . g a 3.000000000000000000000000 q30;ac5 DP=1584;AC=4;AF=0.0025 hxb2_pol 1188 . a g 6.000000000000000000000000 q30 DP=1586;AC=5;AF=0.0032 hxb2_pol 1189 . g a 6.000000000000000000000000 q30 DP=1578;AC=5;AF=0.0032 hxb2_pol 1205 . t c 3.000000000000000000000000 q30;ac5 DP=1583;AC=4;AF=0.0025 hxb2_pol 1206 . g t 6.000000000000000000000000 q30 DP=1566;AC=5;AF=0.0032 hxb2_pol 1208 . c g 3.000000000000000000000000 q30;ac5 DP=1573;AC=4;AF=0.0025 hxb2_pol 1209 . a c 3.000000000000000000000000 q30;ac5 DP=1572;AC=4;AF=0.0025 hxb2_pol 1210 . g a 9.000000000000000000000000 q30 DP=1568;AC=6;AF=0.0038 hxb2_pol 1211 . a g 6.000000000000000000000000 q30 DP=1506;AC=5;AF=0.0033 hxb2_pol 1214 . a c 1.000000000000000000000000 q30;ac5 DP=1569;AC=3;AF=0.0019 hxb2_pol 1215 . c a 6.000000000000000000000000 q30 DP=1564;AC=5;AF=0.0032 hxb2_pol 1217 . g a 3.000000000000000000000000 q30;ac5 DP=1555;AC=4;AF=0.0026 hxb2_pol 1218 . a g 9.000000000000000000000000 q30 DP=1554;AC=6;AF=0.0039 hxb2_pol 1219 . g a 1.000000000000000000000000 q30;ac5 DP=1555;AC=3;AF=0.0019 hxb2_pol 1220 . a g 1.000000000000000000000000 q30;ac5 DP=1552;AC=3;AF=0.0019 hxb2_pol 1221 . g a 6.000000000000000000000000 q30 DP=1551;AC=5;AF=0.0032 hxb2_pol 1222 . a g 1.000000000000000000000000 q30;ac5 DP=1549;AC=3;AF=0.0019 hxb2_pol 1222 . a t 1.000000000000000000000000 q30;ac5 DP=1549;AC=3;AF=0.0019 hxb2_pol 1223 . t a 2.000000000000000000000000 q30;ac5 DP=1538;AC=3;AF=0.0020 hxb2_pol 1224 . t c 2.000000000000000000000000 q30;ac5 DP=1538;AC=3;AF=0.0020 hxb2_pol 1225 . c t 17.00000000000000000000000 q30 DP=1531;AC=8;AF=0.0052 hxb2_pol 1226 . t a 2.000000000000000000000000 q30;ac5 DP=1530;AC=3;AF=0.0020 hxb2_pol 1226 . t c 6.000000000000000000000000 q30 DP=1530;AC=5;AF=0.0033 hxb2_pol 1227 . a t 7.000000000000000000000000 q30 DP=1462;AC=5;AF=0.0034 hxb2_pol 1230 . a g 6.000000000000000000000000 q30 DP=1518;AC=5;AF=0.0033 hxb2_pol 1231 . g a 13.00000000000000000000000 q30 DP=1516;AC=7;AF=0.0046 hxb2_pol 1232 . a g 6.000000000000000000000000 q30 DP=1505;AC=5;AF=0.0033 hxb2_pol 1233 . a c 4.000000000000000000000000 q30;ac5 DP=1520;AC=4;AF=0.0026 hxb2_pol 1236 . a g 3.000000000000000000000000 q30;ac5 DP=1526;AC=4;AF=0.0026 hxb2_pol 1237 . g a 2.000000000000000000000000 q30;ac5 DP=1520;AC=3;AF=0.0020 hxb2_pol 1237 . g t 2.000000000000000000000000 q30;ac5 DP=1520;AC=3;AF=0.0020 hxb2_pol 1238 . t a 4.000000000000000000000000 q30;ac5 DP=1522;AC=4;AF=0.0026 hxb2_pol 1238 . t g 2.000000000000000000000000 q30;ac5 DP=1522;AC=3;AF=0.0020 hxb2_pol 1240 . c a 6.000000000000000000000000 q30 DP=1517;AC=5;AF=0.0033 hxb2_pol 1241 . a t 4.000000000000000000000000 q30;ac5 DP=1520;AC=4;AF=0.0026 hxb2_pol 1242 . t g 2.000000000000000000000000 q30;ac5 DP=1521;AC=3;AF=0.0020 hxb2_pol 1259 . c a 4.000000000000000000000000 q30;ac5 DP=1476;AC=4;AF=0.0027 hxb2_pol 1260 . a c 4.000000000000000000000000 q30;ac5 DP=1475;AC=4;AF=0.0027 hxb2_pol 1260 . a t 4.000000000000000000000000 q30;ac5 DP=1475;AC=4;AF=0.0027 hxb2_pol 1261 . t a 6.000000000000000000000000 q30 DP=1474;AC=5;AF=0.0034 hxb2_pol 1261 . t c 4.000000000000000000000000 q30;ac5 DP=1474;AC=4;AF=0.0027 hxb2_pol 1262 . c a 2.000000000000000000000000 q30;ac5 DP=1477;AC=3;AF=0.0020 hxb2_pol 1262 . c t 4.000000000000000000000000 q30;ac5 DP=1477;AC=4;AF=0.0027 hxb2_pol 1263 . a c 7.000000000000000000000000 q30 DP=1405;AC=5;AF=0.0036 hxb2_pol 1266 . a g 4.000000000000000000000000 q30;ac5 DP=1475;AC=4;AF=0.0027 hxb2_pol 1267 . g a 23.00000000000000000000000 q30 DP=1475;AC=9;AF=0.0061 hxb2_pol 1268 . a c 4.000000000000000000000000 q30;ac5 DP=1474;AC=4;AF=0.0027 hxb2_pol 1268 . a g 14.00000000000000000000000 q30 DP=1474;AC=7;AF=0.0047 hxb2_pol 1269 . c a 14.00000000000000000000000 q30 DP=1476;AC=7;AF=0.0047 hxb2_pol 1269 . c t 2.000000000000000000000000 q30;ac5 DP=1476;AC=3;AF=0.0020 hxb2_pol 1270 . t c 2.000000000000000000000000 q30;ac5 DP=1459;AC=3;AF=0.0021 hxb2_pol 1271 . t a 4.000000000000000000000000 q30;ac5 DP=1477;AC=4;AF=0.0027 hxb2_pol 1273 . a t 2.000000000000000000000000 q30;ac5 DP=1480;AC=3;AF=0.0020 hxb2_pol 1279 . g a 2.000000000000000000000000 q30;ac5 DP=1482;AC=3;AF=0.0020 hxb2_pol 1283 . t a 4.000000000000000000000000 q30;ac5 DP=1475;AC=4;AF=0.0027 hxb2_pol 1284 . a t 2.000000000000000000000000 q30;ac5 DP=1472;AC=3;AF=0.0020 hxb2_pol 1285 . c a 4.000000000000000000000000 q30;ac5 DP=1466;AC=4;AF=0.0027 hxb2_pol 1291 . c g 4.000000000000000000000000 q30;ac5 DP=1452;AC=4;AF=0.0028 hxb2_pol 1292 . a c 7.000000000000000000000000 q30 DP=1441;AC=5;AF=0.0035 hxb2_pol 1293 . g a 7.000000000000000000000000 q30 DP=1369;AC=5;AF=0.0037 hxb2_pol 1296 . g c 14.00000000000000000000000 q30 DP=1413;AC=7;AF=0.0050 hxb2_pol 1297 . c a 19.00000000000000000000000 q30 DP=1410;AC=8;AF=0.0057 hxb2_pol 1297 . c g 7.000000000000000000000000 q30 DP=1410;AC=5;AF=0.0035 hxb2_pol 1298 . a c 24.00000000000000000000000 q30 DP=1400;AC=9;AF=0.0064 hxb2_pol 1299 . a g 29.00000000000000000000000 q30 DP=1413;AC=10;AF=0.0071 hxb2_pol 1300 . g a 11.00000000000000000000000 q30 DP=1399;AC=6;AF=0.0043 hxb2_pol 1301 . g c 29.00000000000000000000000 q30 DP=1416;AC=10;AF=0.0071 hxb2_pol 1302 . c g 4.000000000000000000000000 q30;ac5 DP=1410;AC=4;AF=0.0028 hxb2_pol 1303 . c a 24.00000000000000000000000 q30 DP=1417;AC=9;AF=0.0064 hxb2_pol 1304 . a c 4.000000000000000000000000 q30;ac5 DP=1402;AC=4;AF=0.0029 hxb2_pol 1305 . a t 7.000000000000000000000000 q30 DP=1415;AC=5;AF=0.0035 hxb2_pol 1306 . t a 2.000000000000000000000000 q30;ac5 DP=1415;AC=3;AF=0.0021 hxb2_pol 1306 . t g 4.000000000000000000000000 q30;ac5 DP=1415;AC=4;AF=0.0028 hxb2_pol 1307 . g t 2.000000000000000000000000 q30;ac5 DP=1408;AC=3;AF=0.0021 hxb2_pol 1309 . a g 2.000000000000000000000000 q30;ac5 DP=1411;AC=3;AF=0.0021 hxb2_pol 1310 . c a 4.000000000000000000000000 q30;ac5 DP=1407;AC=4;AF=0.0028 hxb2_pol 1311 . a c 4.000000000000000000000000 q30;ac5 DP=1413;AC=4;AF=0.0028 hxb2_pol 1312 . t a 7.000000000000000000000000 q30 DP=1410;AC=5;AF=0.0035 hxb2_pol 1313 . a t 4.000000000000000000000000 q30;ac5 DP=1408;AC=4;AF=0.0028 hxb2_pol 1314 . t a 4.000000000000000000000000 q30;ac5 DP=1405;AC=4;AF=0.0028 hxb2_pol 1315 . c t 4.000000000000000000000000 q30;ac5 DP=1407;AC=4;AF=0.0028 hxb2_pol 1316 . a c 4.000000000000000000000000 q30;ac5 DP=1366;AC=4;AF=0.0029 hxb2_pol 1318 . a t 2.000000000000000000000000 q30;ac5 DP=1397;AC=3;AF=0.0021 hxb2_pol 1319 . t a 2.000000000000000000000000 q30;ac5 DP=1377;AC=3;AF=0.0022 hxb2_pol 1325 . a c 1.000000000000000000000000 q30;ac5 DP=1372;AC=2;AF=0.0015 hxb2_pol 1326 . a g 2.000000000000000000000000 q30;ac5 DP=1373;AC=3;AF=0.0022 hxb2_pol 1327 . g a 4.000000000000000000000000 q30;ac5 DP=1360;AC=4;AF=0.0029 hxb2_pol 1328 . a g 2.000000000000000000000000 q30;ac5 DP=1354;AC=3;AF=0.0022 hxb2_pol 1329 . g c 1.000000000000000000000000 q30;ac5 DP=1344;AC=2;AF=0.0015 hxb2_pol 1331 . c a 3.000000000000000000000000 q30;ac5 DP=1267;AC=3;AF=0.0024 hxb2_pol 1332 . a c 1.000000000000000000000000 q30;ac5 DP=1226;AC=2;AF=0.0016 hxb2_pol 1332 . a t 3.000000000000000000000000 q30;ac5 DP=1226;AC=3;AF=0.0024 hxb2_pol 1333 . t a 6.000000000000000000000000 q30;ac5 DP=1172;AC=4;AF=0.0034 hxb2_pol 1335 . t a 3.000000000000000000000000 q30;ac5 DP=1190;AC=3;AF=0.0025 hxb2_pol 1336 . a t 19.00000000000000000000000 q30 DP=1114;AC=7;AF=0.0063 hxb2_pol 1340 . a t 9.000000000000000000000000 q30 DP=1198;AC=5;AF=0.0042 hxb2_pol 1341 . t a 6.000000000000000000000000 q30;ac5 DP=1207;AC=4;AF=0.0033 hxb2_pol 1341 . t c 6.000000000000000000000000 q30;ac5 DP=1207;AC=4;AF=0.0033 hxb2_pol 1342 . c t 28.00000000000000000000000 q30 DP=1228;AC=9;AF=0.0073 hxb2_pol 1343 . t c 5.000000000000000000000000 q30;ac5 DP=1241;AC=4;AF=0.0032 hxb2_pol 1343 . t g 5.000000000000000000000000 q30;ac5 DP=1241;AC=4;AF=0.0032 hxb2_pol 1344 . g a 5.000000000000000000000000 q30;ac5 DP=1246;AC=4;AF=0.0032 hxb2_pol 1344 . g t 9.000000000000000000000000 q30 DP=1246;AC=5;AF=0.0040 hxb2_pol 1345 . a g 9.000000000000000000000000 q30 DP=1215;AC=5;AF=0.0041 hxb2_pol 1348 . a c 5.000000000000000000000000 q30;ac5 DP=1243;AC=4;AF=0.0032 hxb2_pol 1349 . c a 28.00000000000000000000000 q30 DP=1243;AC=9;AF=0.0072 hxb2_pol 1350 . a c 13.00000000000000000000000 q30 DP=1243;AC=6;AF=0.0048 hxb2_pol 1350 . a g 3.000000000000000000000000 q30;ac5 DP=1243;AC=3;AF=0.0024 hxb2_pol 1351 . g a 13.00000000000000000000000 q30 DP=1240;AC=6;AF=0.0048 hxb2_pol 1352 . g a 5.000000000000000000000000 q30;ac5 DP=1242;AC=4;AF=0.0032 hxb2_pol 1353 . a g 13.00000000000000000000000 q30 DP=1187;AC=6;AF=0.0051 hxb2_pol 1356 . a t 5.000000000000000000000000 q30;ac5 DP=1252;AC=4;AF=0.0032 hxb2_pol 1357 . t a 3.000000000000000000000000 q30;ac5 DP=1252;AC=3;AF=0.0024 hxb2_pol 1358 . a t 3.000000000000000000000000 q30;ac5 DP=1254;AC=3;AF=0.0024 hxb2_pol 1359 . t g 5.000000000000000000000000 q30;ac5 DP=1250;AC=4;AF=0.0032 hxb2_pol 1360 . g c 1.000000000000000000000000 q30;ac5 DP=1249;AC=2;AF=0.0016 hxb2_pol 1364 . g a 5.000000000000000000000000 q30;ac5 DP=1241;AC=4;AF=0.0032 hxb2_pol 1365 . a g 3.000000000000000000000000 q30;ac5 DP=1235;AC=3;AF=0.0024 hxb2_pol 1367 . t a 3.000000000000000000000000 q30;ac5 DP=1239;AC=3;AF=0.0024 hxb2_pol 1368 . g t 5.000000000000000000000000 q30;ac5 DP=1239;AC=4;AF=0.0032 hxb2_pol 1369 . a g 17.00000000000000000000000 q30 DP=1235;AC=7;AF=0.0057 hxb2_pol 1370 . g a 6.000000000000000000000000 q30;ac5 DP=1177;AC=4;AF=0.0034 hxb2_pol 1373 . g t 5.000000000000000000000000 q30;ac5 DP=1228;AC=4;AF=0.0033 hxb2_pol 1374 . t g 40.00000000000000000000000 PASS DP=1227;AC=11;AF=0.0090 hxb2_pol 1375 . g c 3.000000000000000000000000 q30;ac5 DP=1233;AC=3;AF=0.0024 hxb2_pol 1375 . g t 17.00000000000000000000000 q30 DP=1233;AC=7;AF=0.0057 hxb2_pol 1376 . c g 18.00000000000000000000000 q30 DP=1209;AC=7;AF=0.0058 hxb2_pol 1379 . a c 5.000000000000000000000000 q30;ac5 DP=1237;AC=4;AF=0.0032 hxb2_pol 1380 . c a 3.000000000000000000000000 q30;ac5 DP=1240;AC=3;AF=0.0024 hxb2_pol 1381 . a c 1.000000000000000000000000 q30;ac5 DP=1240;AC=2;AF=0.0016 hxb2_pol 1385 . a t 5.000000000000000000000000 q30;ac5 DP=1246;AC=4;AF=0.0032 hxb2_pol 1386 . t a 1.000000000000000000000000 q30;ac5 DP=1243;AC=2;AF=0.0016 hxb2_pol 1386 . t g 3.000000000000000000000000 q30;ac5 DP=1243;AC=3;AF=0.0024 hxb2_pol 1387 . g a 3.000000000000000000000000 q30;ac5 DP=1245;AC=3;AF=0.0024 hxb2_pol 1387 . g t 3.000000000000000000000000 q30;ac5 DP=1245;AC=3;AF=0.0024 hxb2_pol 1388 . a g 1.000000000000000000000000 q30;ac5 DP=1247;AC=2;AF=0.0016 hxb2_pol 1388 . a t 3.000000000000000000000000 q30;ac5 DP=1247;AC=3;AF=0.0024 hxb2_pol 1389 . t a 1.000000000000000000000000 q30;ac5 DP=1247;AC=2;AF=0.0016 hxb2_pol 1389 . t g 3.000000000000000000000000 q30;ac5 DP=1247;AC=3;AF=0.0024 hxb2_pol 1390 . g t 9.000000000000000000000000 q30 DP=1246;AC=5;AF=0.0040 hxb2_pol 1391 . t a 3.000000000000000000000000 q30;ac5 DP=1241;AC=3;AF=0.0024 hxb2_pol 1391 . t g 3.000000000000000000000000 q30;ac5 DP=1241;AC=3;AF=0.0024 hxb2_pol 1392 . a t 6.000000000000000000000000 q30;ac5 DP=1190;AC=4;AF=0.0034 hxb2_pol 1395 . a c 5.000000000000000000000000 q30;ac5 DP=1243;AC=4;AF=0.0032 hxb2_pol 1396 . c a 3.000000000000000000000000 q30;ac5 DP=1237;AC=3;AF=0.0024 hxb2_pol 1399 . t a 1.000000000000000000000000 q30;ac5 DP=1232;AC=2;AF=0.0016 hxb2_pol 1410 . a c 1.000000000000000000000000 q30;ac5 DP=1224;AC=2;AF=0.0016 hxb2_pol 1411 . g a 3.000000000000000000000000 q30;ac5 DP=1215;AC=3;AF=0.0025 hxb2_pol 1412 . t g 3.000000000000000000000000 q30;ac5 DP=1194;AC=3;AF=0.0025 hxb2_pol 1413 . g t 6.000000000000000000000000 q30;ac5 DP=1162;AC=4;AF=0.0034 hxb2_pol 1414 . c g 6.000000000000000000000000 q30;ac5 DP=1144;AC=4;AF=0.0035 hxb2_pol 1415 . a c 8.000000000000000000000000 q30;ac5 DP=987;AC=4;AF=0.0041 hxb2_pol 1420 . a t 3.000000000000000000000000 q30;ac5 DP=1096;AC=3;AF=0.0027 hxb2_pol 1421 . t a 1.000000000000000000000000 q30;ac5 DP=1099;AC=2;AF=0.0018 hxb2_pol 1423 . a c 6.000000000000000000000000 q30;ac5 DP=1129;AC=4;AF=0.0035 hxb2_pol 1425 . c a 1.000000000000000000000000 q30;ac5 DP=1208;AC=2;AF=0.0017 hxb2_pol 1426 . a c 1.000000000000000000000000 q30;ac5 DP=1220;AC=2;AF=0.0016 hxb2_pol 1427 . c a 1.000000000000000000000000 q30;ac5 DP=1228;AC=2;AF=0.0016 hxb2_pol 1428 . a g 1.000000000000000000000000 q30;ac5 DP=1229;AC=2;AF=0.0016 hxb2_pol 1429 . g a 1.000000000000000000000000 q30;ac5 DP=1228;AC=2;AF=0.0016 hxb2_pol 1439 . t a 3.000000000000000000000000 q30;ac5 DP=1240;AC=3;AF=0.0024 hxb2_pol 1439 . t g 1.000000000000000000000000 q30;ac5 DP=1240;AC=2;AF=0.0016 hxb2_pol 1441 . a t 3.000000000000000000000000 q30;ac5 DP=1233;AC=3;AF=0.0024 hxb2_pol 1442 . t a 13.00000000000000000000000 q30 DP=1230;AC=6;AF=0.0049 hxb2_pol 1443 . a t 22.00000000000000000000000 q30 DP=1229;AC=8;AF=0.0065 hxb2_pol 1444 . t a 17.00000000000000000000000 q30 DP=1227;AC=7;AF=0.0057 hxb2_pol 1445 . g t 23.00000000000000000000000 q30 DP=1179;AC=8;AF=0.0068 hxb2_pol 1448 . g a 5.000000000000000000000000 q30;ac5 DP=1214;AC=4;AF=0.0033 hxb2_pol 1449 . a g 9.000000000000000000000000 q30 DP=1193;AC=5;AF=0.0042 hxb2_pol 1451 . a g 5.000000000000000000000000 q30;ac5 DP=1217;AC=4;AF=0.0033 hxb2_pol 1452 . g a 17.00000000000000000000000 q30 DP=1218;AC=7;AF=0.0057 hxb2_pol 1453 . a c 9.000000000000000000000000 q30 DP=1223;AC=5;AF=0.0041 hxb2_pol 1453 . a g 5.000000000000000000000000 q30;ac5 DP=1223;AC=4;AF=0.0033 hxb2_pol 1454 . c a 3.000000000000000000000000 q30;ac5 DP=1230;AC=3;AF=0.0024 hxb2_pol 1454 . c t 9.000000000000000000000000 q30 DP=1230;AC=5;AF=0.0041 hxb2_pol 1455 . t c 17.00000000000000000000000 q30 DP=1234;AC=7;AF=0.0057 hxb2_pol 1456 . c t 3.000000000000000000000000 q30;ac5 DP=1236;AC=3;AF=0.0024 hxb2_pol 1458 . t a 1.000000000000000000000000 q30;ac5 DP=1233;AC=2;AF=0.0016 hxb2_pol 1461 . a t 9.000000000000000000000000 q30 DP=1226;AC=5;AF=0.0041 hxb2_pol 1462 . t a 1.000000000000000000000000 q30;ac5 DP=1210;AC=2;AF=0.0017 hxb2_pol 1464 . t a 13.00000000000000000000000 q30 DP=1229;AC=6;AF=0.0049 hxb2_pol 1467 . a c 1.000000000000000000000000 q30;ac5 DP=1249;AC=2;AF=0.0016 hxb2_pol 1468 . c a 3.000000000000000000000000 q30;ac5 DP=1262;AC=3;AF=0.0024 hxb2_pol 1469 . t c 3.000000000000000000000000 q30;ac5 DP=1269;AC=3;AF=0.0024 hxb2_pol 1470 . g t 3.000000000000000000000000 q30;ac5 DP=1270;AC=3;AF=0.0024 hxb2_pol 1471 . c g 5.000000000000000000000000 q30;ac5 DP=1256;AC=4;AF=0.0032 hxb2_pol 1474 . a c 2.000000000000000000000000 q30;ac5 DP=1279;AC=3;AF=0.0023 hxb2_pol 1475 . t a 17.00000000000000000000000 q30 DP=1277;AC=7;AF=0.0055 hxb2_pol 1476 . a t 5.000000000000000000000000 q30;ac5 DP=1276;AC=4;AF=0.0031 hxb2_pol 1477 . c a 8.000000000000000000000000 q30 DP=1272;AC=5;AF=0.0039 hxb2_pol 1478 . a c 3.000000000000000000000000 q30;ac5 DP=1214;AC=3;AF=0.0025 hxb2_pol 1481 . a g 17.00000000000000000000000 q30 DP=1264;AC=7;AF=0.0055 hxb2_pol 1482 . g a 3.000000000000000000000000 q30;ac5 DP=1257;AC=3;AF=0.0024 hxb2_pol 1483 . g a 27.00000000000000000000000 q30 DP=1267;AC=9;AF=0.0071 hxb2_pol 1484 . a g 5.000000000000000000000000 q30;ac5 DP=1237;AC=4;AF=0.0032 hxb2_pol 1486 . a c 16.00000000000000000000000 q30 DP=1288;AC=7;AF=0.0054 hxb2_pol 1487 . c a 21.00000000000000000000000 q30 DP=1312;AC=8;AF=0.0061 hxb2_pol 1488 . a t 16.00000000000000000000000 q30 DP=1324;AC=7;AF=0.0053 hxb2_pol 1489 . t g 16.00000000000000000000000 q30 DP=1329;AC=7;AF=0.0053 hxb2_pol 1492 . g a 11.00000000000000000000000 q30 DP=1335;AC=6;AF=0.0045 hxb2_pol 1496 . c a 11.00000000000000000000000 q30 DP=1355;AC=6;AF=0.0044 hxb2_pol 1497 . a c 7.000000000000000000000000 q30 DP=1357;AC=5;AF=0.0037 hxb2_pol 1498 . t a 7.000000000000000000000000 q30 DP=1360;AC=5;AF=0.0037 hxb2_pol 1499 . g t 7.000000000000000000000000 q30 DP=1353;AC=5;AF=0.0037 hxb2_pol 1500 . g t 1.000000000000000000000000 q30;ac5 DP=1371;AC=2;AF=0.0015 hxb2_pol 1501 . t g 7.000000000000000000000000 q30 DP=1368;AC=5;AF=0.0037 hxb2_pol 1502 . g t 2.000000000000000000000000 q30;ac5 DP=1362;AC=3;AF=0.0022 hxb2_pol 1508 . a g 1.000000000000000000000000 q30;ac5 DP=1378;AC=2;AF=0.0015 hxb2_pol 1509 . g a 1.000000000000000000000000 q30;ac5 DP=1376;AC=2;AF=0.0015 hxb2_pol 1509 . g t 2.000000000000000000000000 q30;ac5 DP=1376;AC=3;AF=0.0022 hxb2_pol 1510 . t a 2.000000000000000000000000 q30;ac5 DP=1376;AC=3;AF=0.0022 hxb2_pol 1510 . t g 1.000000000000000000000000 q30;ac5 DP=1376;AC=2;AF=0.0015 hxb2_pol 1511 . a t 7.000000000000000000000000 q30 DP=1380;AC=5;AF=0.0036 hxb2_pol 1512 . t a 1.000000000000000000000000 q30;ac5 DP=1376;AC=2;AF=0.0015 hxb2_pol 1513 . t g 1.000000000000000000000000 q30;ac5 DP=1386;AC=2;AF=0.0014 hxb2_pol 1514 . g t 2.000000000000000000000000 q30;ac5 DP=1369;AC=3;AF=0.0022 hxb2_pol 1515 . g c 1.000000000000000000000000 q30;ac5 DP=1391;AC=2;AF=0.0014 hxb2_pol 1516 . c g 1.000000000000000000000000 q30;ac5 DP=1389;AC=2;AF=0.0014 hxb2_pol 1517 . a c 2.000000000000000000000000 q30;ac5 DP=1380;AC=3;AF=0.0022 hxb2_pol 1518 . a g 1.000000000000000000000000 q30;ac5 DP=1393;AC=2;AF=0.0014 hxb2_pol 1519 . g a 1.000000000000000000000000 q30;ac5 DP=1393;AC=2;AF=0.0014 hxb2_pol 1519 . g c 2.000000000000000000000000 q30;ac5 DP=1393;AC=3;AF=0.0022 hxb2_pol 1520 . c g 2.000000000000000000000000 q30;ac5 DP=1384;AC=3;AF=0.0022 hxb2_pol 1522 . a c 2.000000000000000000000000 q30;ac5 DP=1391;AC=3;AF=0.0022 hxb2_pol 1523 . c a 2.000000000000000000000000 q30;ac5 DP=1386;AC=3;AF=0.0022 hxb2_pol 1524 . c t 1.000000000000000000000000 q30;ac5 DP=1393;AC=2;AF=0.0014 hxb2_pol 1525 . t c 1.000000000000000000000000 q30;ac5 DP=1392;AC=2;AF=0.0014 hxb2_pol 1525 . t g 2.000000000000000000000000 q30;ac5 DP=1392;AC=3;AF=0.0022 hxb2_pol 1526 . g t 1.000000000000000000000000 q30;ac5 DP=1385;AC=2;AF=0.0014 hxb2_pol 1527 . g a 1.000000000000000000000000 q30;ac5 DP=1393;AC=2;AF=0.0014 hxb2_pol 1528 . a g 1.000000000000000000000000 q30;ac5 DP=1396;AC=2;AF=0.0014 hxb2_pol 1528 . a t 1.000000000000000000000000 q30;ac5 DP=1396;AC=2;AF=0.0014 hxb2_pol 1529 . t a 2.000000000000000000000000 q30;ac5 DP=1383;AC=3;AF=0.0022 hxb2_pol 1530 . t c 1.000000000000000000000000 q30;ac5 DP=1397;AC=2;AF=0.0014 hxb2_pol 1531 . c t 1.000000000000000000000000 q30;ac5 DP=1384;AC=2;AF=0.0014 hxb2_pol 1532 . c t 1.000000000000000000000000 q30;ac5 DP=1392;AC=2;AF=0.0014 hxb2_pol 1534 . g t 1.000000000000000000000000 q30;ac5 DP=1392;AC=2;AF=0.0014 hxb2_pol 1535 . a g 1.000000000000000000000000 q30;ac5 DP=1393;AC=2;AF=0.0014 hxb2_pol 1537 . t g 1.000000000000000000000000 q30;ac5 DP=1391;AC=2;AF=0.0014 hxb2_pol 1538 . g t 1.000000000000000000000000 q30;ac5 DP=1357;AC=2;AF=0.0015 hxb2_pol 1540 . g a 1.000000000000000000000000 q30;ac5 DP=1385;AC=2;AF=0.0014 hxb2_pol 1541 . a g 20.00000000000000000000000 q30 DP=1378;AC=8;AF=0.0058 hxb2_pol 1542 . g a 25.00000000000000000000000 q30 DP=1386;AC=9;AF=0.0065 hxb2_pol 1542 . g t 2.000000000000000000000000 q30;ac5 DP=1386;AC=3;AF=0.0022 hxb2_pol 1543 . t g 25.00000000000000000000000 q30 DP=1365;AC=9;AF=0.0066 hxb2_pol 1545 . t g 2.000000000000000000000000 q30;ac5 DP=1389;AC=3;AF=0.0022 hxb2_pol 1546 . g t 42.00000000000000000000000 PASS DP=1388;AC=12;AF=0.0086 hxb2_pol 1547 . t g 25.00000000000000000000000 q30 DP=1376;AC=9;AF=0.0065 hxb2_pol 1548 . t a 4.000000000000000000000000 q30;ac5 DP=1388;AC=4;AF=0.0029 hxb2_pol 1549 . a t 15.00000000000000000000000 q30 DP=1377;AC=7;AF=0.0051 hxb2_pol 1550 . a t 1.000000000000000000000000 q30;ac5 DP=1381;AC=2;AF=0.0014 hxb2_pol 1551 . t a 25.00000000000000000000000 q30 DP=1379;AC=9;AF=0.0065 hxb2_pol 1552 . a c 1.000000000000000000000000 q30;ac5 DP=1378;AC=2;AF=0.0015 hxb2_pol 1552 . a t 20.00000000000000000000000 q30 DP=1378;AC=8;AF=0.0058 hxb2_pol 1553 . c a 21.00000000000000000000000 q30 DP=1310;AC=8;AF=0.0061 hxb2_pol 1556 . c t 25.00000000000000000000000 q30 DP=1365;AC=9;AF=0.0066 hxb2_pol 1557 . t c 57.00000000000000000000000 PASS DP=1362;AC=14;AF=0.0103 hxb2_pol 1558 . c t 16.00000000000000000000000 q30 DP=1338;AC=7;AF=0.0052 hxb2_pol 1560 . c t 15.00000000000000000000000 q30 DP=1369;AC=7;AF=0.0051 hxb2_pol 1561 . t c 11.00000000000000000000000 q30 DP=1366;AC=6;AF=0.0044 hxb2_pol 1562 . t a 7.000000000000000000000000 q30 DP=1397;AC=5;AF=0.0036 hxb2_pol 1563 . a g 7.000000000000000000000000 q30 DP=1408;AC=5;AF=0.0036 hxb2_pol 1563 . a t 4.000000000000000000000000 q30;ac5 DP=1408;AC=4;AF=0.0028 hxb2_pol 1564 . g a 2.000000000000000000000000 q30;ac5 DP=1408;AC=3;AF=0.0021 hxb2_pol 1564 . g t 1.000000000000000000000000 q30;ac5 DP=1408;AC=2;AF=0.0014 hxb2_pol 1565 . t g 7.000000000000000000000000 q30 DP=1413;AC=5;AF=0.0035 hxb2_pol 1566 . g a 2.000000000000000000000000 q30;ac5 DP=1413;AC=3;AF=0.0021 hxb2_pol 1566 . g t 4.000000000000000000000000 q30;ac5 DP=1413;AC=4;AF=0.0028 hxb2_pol 1567 . a g 4.000000000000000000000000 q30;ac5 DP=1378;AC=4;AF=0.0029 hxb2_pol 1569 . a t 4.000000000000000000000000 q30;ac5 DP=1424;AC=4;AF=0.0028 hxb2_pol 1570 . t a 10.00000000000000000000000 q30 DP=1419;AC=6;AF=0.0042 hxb2_pol 1572 . a t 19.00000000000000000000000 q30 DP=1435;AC=8;AF=0.0056 hxb2_pol 1573 . t a 7.000000000000000000000000 q30 DP=1440;AC=5;AF=0.0035 hxb2_pol 1573 . t g 2.000000000000000000000000 q30;ac5 DP=1440;AC=3;AF=0.0021 hxb2_pol 1574 . g t 14.00000000000000000000000 q30 DP=1419;AC=7;AF=0.0049 hxb2_pol 1576 . t g 7.000000000000000000000000 q30 DP=1438;AC=5;AF=0.0035 hxb2_pol 1577 . a t 7.000000000000000000000000 q30 DP=1436;AC=5;AF=0.0035 hxb2_pol 1578 . c a 4.000000000000000000000000 q30;ac5 DP=1428;AC=4;AF=0.0028 hxb2_pol 1580 . a g 2.000000000000000000000000 q30;ac5 DP=1443;AC=3;AF=0.0021 hxb2_pol 1586 . a g 4.000000000000000000000000 q30;ac5 DP=1447;AC=4;AF=0.0028 hxb2_pol 1587 . g a 2.000000000000000000000000 q30;ac5 DP=1442;AC=3;AF=0.0021 hxb2_pol 1590 . a g 19.00000000000000000000000 q30 DP=1437;AC=8;AF=0.0056 hxb2_pol 1591 . g a 41.00000000000000000000000 PASS DP=1434;AC=12;AF=0.0084 hxb2_pol 1592 . a g 2.000000000000000000000000 q30;ac5 DP=1422;AC=3;AF=0.0021 hxb2_pol 1593 . a c 19.00000000000000000000000 q30 DP=1434;AC=8;AF=0.0056 hxb2_pol 1594 . c a 7.000000000000000000000000 q30 DP=1398;AC=5;AF=0.0036 hxb2_pol 1596 . c a 10.00000000000000000000000 q30 DP=1438;AC=6;AF=0.0042 hxb2_pol 1597 . a t 2.000000000000000000000000 q30;ac5 DP=1442;AC=3;AF=0.0021 hxb2_pol 1598 . t a 7.000000000000000000000000 q30 DP=1444;AC=5;AF=0.0035 hxb2_pol 1600 . g a 2.000000000000000000000000 q30;ac5 DP=1452;AC=3;AF=0.0021 hxb2_pol 1608 . a c 2.000000000000000000000000 q30;ac5 DP=1452;AC=3;AF=0.0021 hxb2_pol 1609 . g a 14.00000000000000000000000 q30 DP=1448;AC=7;AF=0.0048 hxb2_pol 1610 . a g 7.000000000000000000000000 q30 DP=1411;AC=5;AF=0.0035 hxb2_pol 1612 . a c 4.000000000000000000000000 q30;ac5 DP=1453;AC=4;AF=0.0028 hxb2_pol 1613 . c a 4.000000000000000000000000 q30;ac5 DP=1441;AC=4;AF=0.0028 hxb2_pol 1614 . c t 14.00000000000000000000000 q30 DP=1454;AC=7;AF=0.0048 hxb2_pol 1615 . t c 2.000000000000000000000000 q30;ac5 DP=1443;AC=3;AF=0.0021 hxb2_pol 1616 . t c 2.000000000000000000000000 q30;ac5 DP=1456;AC=3;AF=0.0021 hxb2_pol 1617 . c t 18.00000000000000000000000 q30 DP=1456;AC=8;AF=0.0055 hxb2_pol 1618 . t a 2.000000000000000000000000 q30;ac5 DP=1455;AC=3;AF=0.0021 hxb2_pol 1618 . t c 2.000000000000000000000000 q30;ac5 DP=1455;AC=3;AF=0.0021 hxb2_pol 1619 . a t 4.000000000000000000000000 q30;ac5 DP=1457;AC=4;AF=0.0027 hxb2_pol 1624 . g a 4.000000000000000000000000 q30;ac5 DP=1444;AC=4;AF=0.0028 hxb2_pol 1625 . a g 2.000000000000000000000000 q30;ac5 DP=1447;AC=3;AF=0.0021 hxb2_pol 1626 . t a 2.000000000000000000000000 q30;ac5 DP=1447;AC=3;AF=0.0021 hxb2_pol 1627 . g t 4.000000000000000000000000 q30;ac5 DP=1381;AC=4;AF=0.0029 hxb2_pol 1630 . g c 4.000000000000000000000000 q30;ac5 DP=1442;AC=4;AF=0.0028 hxb2_pol 1631 . c a 4.000000000000000000000000 q30;ac5 DP=1438;AC=4;AF=0.0028 hxb2_pol 1632 . a g 4.000000000000000000000000 q30;ac5 DP=1441;AC=4;AF=0.0028 hxb2_pol 1633 . g c 2.000000000000000000000000 q30;ac5 DP=1439;AC=3;AF=0.0021 hxb2_pol 1638 . c a 4.000000000000000000000000 q30;ac5 DP=1439;AC=4;AF=0.0028 hxb2_pol 1640 . g a 2.000000000000000000000000 q30;ac5 DP=1396;AC=3;AF=0.0021 hxb2_pol 1643 . a g 2.000000000000000000000000 q30;ac5 DP=1428;AC=3;AF=0.0021 hxb2_pol 1644 . g a 4.000000000000000000000000 q30;ac5 DP=1425;AC=4;AF=0.0028 hxb2_pol 1645 . a g 2.000000000000000000000000 q30;ac5 DP=1426;AC=3;AF=0.0021 hxb2_pol 1646 . c a 4.000000000000000000000000 q30;ac5 DP=1427;AC=4;AF=0.0028 hxb2_pol 1647 . t c 2.000000000000000000000000 q30;ac5 DP=1420;AC=3;AF=0.0021 hxb2_pol 1648 . a t 1.000000000000000000000000 q30;ac5 DP=1390;AC=2;AF=0.0014 hxb2_pol 1650 . a t 4.000000000000000000000000 q30;ac5 DP=1410;AC=4;AF=0.0028 hxb2_pol 1651 . t a 2.000000000000000000000000 q30;ac5 DP=1387;AC=3;AF=0.0022 hxb2_pol 1652 . t a 1.000000000000000000000000 q30;ac5 DP=1397;AC=2;AF=0.0014 hxb2_pol 1653 . a g 1.000000000000000000000000 q30;ac5 DP=1391;AC=2;AF=0.0014 hxb2_pol 1653 . a t 1.000000000000000000000000 q30;ac5 DP=1391;AC=2;AF=0.0014 hxb2_pol 1654 . g a 1.000000000000000000000000 q30;ac5 DP=1387;AC=2;AF=0.0014 hxb2_pol 1655 . g a 4.000000000000000000000000 q30;ac5 DP=1393;AC=4;AF=0.0029 hxb2_pol 1656 . a g 2.000000000000000000000000 q30;ac5 DP=1331;AC=3;AF=0.0023 hxb2_pol 1659 . a g 1.000000000000000000000000 q30;ac5 DP=1399;AC=2;AF=0.0014 hxb2_pol 1660 . g a 1.000000000000000000000000 q30;ac5 DP=1406;AC=2;AF=0.0014 hxb2_pol 1661 . c g 1.000000000000000000000000 q30;ac5 DP=1405;AC=2;AF=0.0014 hxb2_pol 1662 . a c 1.000000000000000000000000 q30;ac5 DP=1407;AC=2;AF=0.0014 hxb2_pol 1663 . g a 2.000000000000000000000000 q30;ac5 DP=1399;AC=3;AF=0.0021 hxb2_pol 1669 . g t 1.000000000000000000000000 q30;ac5 DP=1402;AC=2;AF=0.0014 hxb2_pol 1673 . c t 1.000000000000000000000000 q30;ac5 DP=1404;AC=2;AF=0.0014 hxb2_pol 1680 . a g 2.000000000000000000000000 q30;ac5 DP=1404;AC=3;AF=0.0021 hxb2_pol 1682 . g a 2.000000000000000000000000 q30;ac5 DP=1404;AC=3;AF=0.0021 hxb2_pol 1683 . a g 2.000000000000000000000000 q30;ac5 DP=1386;AC=3;AF=0.0022 hxb2_pol 1685 . g a 4.000000000000000000000000 q30;ac5 DP=1379;AC=4;AF=0.0029 hxb2_pol 1686 . a g 11.00000000000000000000000 q30 DP=1375;AC=6;AF=0.0044 hxb2_pol 1687 . c a 7.000000000000000000000000 q30 DP=1362;AC=5;AF=0.0037 hxb2_pol 1688 . a c 12.00000000000000000000000 q30 DP=1265;AC=6;AF=0.0047 hxb2_pol 1692 . a g 7.000000000000000000000000 q30 DP=1361;AC=5;AF=0.0037 hxb2_pol 1693 . g a 4.000000000000000000000000 q30;ac5 DP=1362;AC=4;AF=0.0029 hxb2_pol 1693 . g t 11.00000000000000000000000 q30 DP=1362;AC=6;AF=0.0044 hxb2_pol 1694 . t g 15.00000000000000000000000 q30 DP=1361;AC=7;AF=0.0051 hxb2_pol 1695 . t g 11.00000000000000000000000 q30 DP=1368;AC=6;AF=0.0044 hxb2_pol 1696 . g t 25.00000000000000000000000 q30 DP=1370;AC=9;AF=0.0066 hxb2_pol 1697 . t c 11.00000000000000000000000 q30 DP=1377;AC=6;AF=0.0044 hxb2_pol 1697 . t g 4.000000000000000000000000 q30;ac5 DP=1377;AC=4;AF=0.0029 hxb2_pol 1698 . c a 11.00000000000000000000000 q30 DP=1384;AC=6;AF=0.0043 hxb2_pol 1698 . c t 7.000000000000000000000000 q30 DP=1384;AC=5;AF=0.0036 hxb2_pol 1699 . a c 30.00000000000000000000000 PASS DP=1380;AC=10;AF=0.0072 hxb2_pol 1700 . c a 7.000000000000000000000000 q30 DP=1354;AC=5;AF=0.0037 hxb2_pol 1702 . c t 4.000000000000000000000000 q30;ac5 DP=1385;AC=4;AF=0.0029 hxb2_pol 1703 . t a 11.00000000000000000000000 q30 DP=1379;AC=6;AF=0.0044 hxb2_pol 1703 . t c 2.000000000000000000000000 q30;ac5 DP=1379;AC=3;AF=0.0022 hxb2_pol 1704 . a t 4.000000000000000000000000 q30;ac5 DP=1373;AC=4;AF=0.0029 hxb2_pol 1705 . a c 1.000000000000000000000000 q30;ac5 DP=1388;AC=2;AF=0.0014 hxb2_pol 1706 . c a 1.000000000000000000000000 q30;ac5 DP=1388;AC=2;AF=0.0014 hxb2_pol 1711 . a c 1.000000000000000000000000 q30;ac5 DP=1392;AC=2;AF=0.0014 hxb2_pol 1712 . c a 2.000000000000000000000000 q30;ac5 DP=1393;AC=3;AF=0.0022 hxb2_pol 1713 . a c 1.000000000000000000000000 q30;ac5 DP=1384;AC=2;AF=0.0014 hxb2_pol 1714 . a c 2.000000000000000000000000 q30;ac5 DP=1396;AC=3;AF=0.0021 hxb2_pol 1715 . c a 11.00000000000000000000000 q30 DP=1396;AC=6;AF=0.0043 hxb2_pol 1718 . a t 4.000000000000000000000000 q30;ac5 DP=1396;AC=4;AF=0.0029 hxb2_pol 1719 . t c 7.000000000000000000000000 q30 DP=1391;AC=5;AF=0.0036 hxb2_pol 1720 . c a 2.000000000000000000000000 q30;ac5 DP=1392;AC=3;AF=0.0022 hxb2_pol 1721 . a g 1.000000000000000000000000 q30;ac5 DP=1391;AC=2;AF=0.0014 hxb2_pol 1722 . g a 4.000000000000000000000000 q30;ac5 DP=1389;AC=4;AF=0.0029 hxb2_pol 1733 . t a 1.000000000000000000000000 q30;ac5 DP=1388;AC=2;AF=0.0014 hxb2_pol 1734 . a c 2.000000000000000000000000 q30;ac5 DP=1386;AC=3;AF=0.0022 hxb2_pol 1734 . a t 7.000000000000000000000000 q30 DP=1386;AC=5;AF=0.0036 hxb2_pol 1735 . c a 15.00000000000000000000000 q30 DP=1385;AC=7;AF=0.0051 hxb2_pol 1736 . a c 2.000000000000000000000000 q30;ac5 DP=1369;AC=3;AF=0.0022 hxb2_pol 1737 . a g 4.000000000000000000000000 q30;ac5 DP=1383;AC=4;AF=0.0029 hxb2_pol 1738 . g c 4.000000000000000000000000 q30;ac5 DP=1384;AC=4;AF=0.0029 hxb2_pol 1739 . c a 4.000000000000000000000000 q30;ac5 DP=1385;AC=4;AF=0.0029 hxb2_pol 1741 . a t 4.000000000000000000000000 q30;ac5 DP=1383;AC=4;AF=0.0029 hxb2_pol 1742 . t a 1.000000000000000000000000 q30;ac5 DP=1345;AC=2;AF=0.0015 hxb2_pol 1744 . t a 1.000000000000000000000000 q30;ac5 DP=1387;AC=2;AF=0.0014 hxb2_pol 1752 . t c 1.000000000000000000000000 q30;ac5 DP=1340;AC=2;AF=0.0015 hxb2_pol 1754 . t g 2.000000000000000000000000 q30;ac5 DP=1372;AC=3;AF=0.0022 hxb2_pol 1755 . g c 1.000000000000000000000000 q30;ac5 DP=1372;AC=2;AF=0.0015 hxb2_pol 1755 . g t 4.000000000000000000000000 q30;ac5 DP=1372;AC=4;AF=0.0029 hxb2_pol 1756 . c g 2.000000000000000000000000 q30;ac5 DP=1372;AC=3;AF=0.0022 hxb2_pol 1757 . a c 4.000000000000000000000000 q30;ac5 DP=1372;AC=4;AF=0.0029 hxb2_pol 1758 . g a 4.000000000000000000000000 q30;ac5 DP=1359;AC=4;AF=0.0029 hxb2_pol 1759 . g a 2.000000000000000000000000 q30;ac5 DP=1372;AC=3;AF=0.0022 hxb2_pol 1760 . a g 2.000000000000000000000000 q30;ac5 DP=1369;AC=3;AF=0.0022 hxb2_pol 1760 . a t 2.000000000000000000000000 q30;ac5 DP=1369;AC=3;AF=0.0022 hxb2_pol 1761 . t a 4.000000000000000000000000 q30;ac5 DP=1353;AC=4;AF=0.0030 hxb2_pol 1762 . t c 1.000000000000000000000000 q30;ac5 DP=1365;AC=2;AF=0.0015 hxb2_pol 1763 . c g 2.000000000000000000000000 q30;ac5 DP=1361;AC=3;AF=0.0022 hxb2_pol 1763 . c t 2.000000000000000000000000 q30;ac5 DP=1361;AC=3;AF=0.0022 hxb2_pol 1764 . g c 2.000000000000000000000000 q30;ac5 DP=1329;AC=3;AF=0.0023 hxb2_pol 1766 . g a 4.000000000000000000000000 q30;ac5 DP=1362;AC=4;AF=0.0029 hxb2_pol 1767 . a g 2.000000000000000000000000 q30;ac5 DP=1363;AC=3;AF=0.0022 hxb2_pol 1767 . a t 2.000000000000000000000000 q30;ac5 DP=1363;AC=3;AF=0.0022 hxb2_pol 1768 . t a 4.000000000000000000000000 q30;ac5 DP=1352;AC=4;AF=0.0030 hxb2_pol 1769 . t a 7.000000000000000000000000 q30 DP=1366;AC=5;AF=0.0037 hxb2_pol 1770 . a g 4.000000000000000000000000 q30;ac5 DP=1361;AC=4;AF=0.0029 hxb2_pol 1770 . a t 1.000000000000000000000000 q30;ac5 DP=1361;AC=2;AF=0.0015 hxb2_pol 1771 . g a 20.00000000000000000000000 q30 DP=1360;AC=8;AF=0.0059 hxb2_pol 1773 . a g 4.000000000000000000000000 q30;ac5 DP=1360;AC=4;AF=0.0029 hxb2_pol 1774 . g t 2.000000000000000000000000 q30;ac5 DP=1358;AC=3;AF=0.0022 hxb2_pol 1775 . t a 2.000000000000000000000000 q30;ac5 DP=1352;AC=3;AF=0.0022 hxb2_pol 1775 . t g 1.000000000000000000000000 q30;ac5 DP=1352;AC=2;AF=0.0015 hxb2_pol 1776 . a t 2.000000000000000000000000 q30;ac5 DP=1333;AC=3;AF=0.0023 hxb2_pol 1778 . a c 7.000000000000000000000000 q30 DP=1357;AC=5;AF=0.0037 hxb2_pol 1779 . c a 11.00000000000000000000000 q30 DP=1350;AC=6;AF=0.0044 hxb2_pol 1780 . a c 2.000000000000000000000000 q30;ac5 DP=1359;AC=3;AF=0.0022 hxb2_pol 1780 . a t 1.000000000000000000000000 q30;ac5 DP=1359;AC=2;AF=0.0015 hxb2_pol 1781 . t a 7.000000000000000000000000 q30 DP=1356;AC=5;AF=0.0037 hxb2_pol 1782 . a g 1.000000000000000000000000 q30;ac5 DP=1352;AC=2;AF=0.0015 hxb2_pol 1782 . a t 1.000000000000000000000000 q30;ac5 DP=1352;AC=2;AF=0.0015 hxb2_pol 1783 . g a 1.000000000000000000000000 q30;ac5 DP=1354;AC=2;AF=0.0015 hxb2_pol 1783 . g t 1.000000000000000000000000 q30;ac5 DP=1354;AC=2;AF=0.0015 hxb2_pol 1784 . t a 1.000000000000000000000000 q30;ac5 DP=1354;AC=2;AF=0.0015 hxb2_pol 1786 . a c 1.000000000000000000000000 q30;ac5 DP=1356;AC=2;AF=0.0015 hxb2_pol 1787 . c a 1.000000000000000000000000 q30;ac5 DP=1356;AC=2;AF=0.0015 hxb2_pol 1790 . a c 1.000000000000000000000000 q30;ac5 DP=1349;AC=2;AF=0.0015 hxb2_pol 1791 . c t 2.000000000000000000000000 q30;ac5 DP=1349;AC=3;AF=0.0022 hxb2_pol 1792 . t c 8.000000000000000000000000 q30 DP=1349;AC=5;AF=0.0037 hxb2_pol 1793 . c a 2.000000000000000000000000 q30;ac5 DP=1352;AC=3;AF=0.0022 hxb2_pol 1793 . c t 1.000000000000000000000000 q30;ac5 DP=1352;AC=2;AF=0.0015 hxb2_pol 1794 . a c 5.000000000000000000000000 q30;ac5 DP=1350;AC=4;AF=0.0030 hxb2_pol 1795 . c a 11.00000000000000000000000 q30 DP=1346;AC=6;AF=0.0045 hxb2_pol 1796 . a c 1.000000000000000000000000 q30;ac5 DP=1330;AC=2;AF=0.0015 hxb2_pol 1797 . a t 1.000000000000000000000000 q30;ac5 DP=1352;AC=2;AF=0.0015 hxb2_pol 1798 . t a 5.000000000000000000000000 q30;ac5 DP=1344;AC=4;AF=0.0030 hxb2_pol 1799 . a t 2.000000000000000000000000 q30;ac5 DP=1347;AC=3;AF=0.0022 hxb2_pol 1801 . g t 1.000000000000000000000000 q30;ac5 DP=1340;AC=2;AF=0.0015 hxb2_pol 1802 . c g 1.000000000000000000000000 q30;ac5 DP=1337;AC=2;AF=0.0015 hxb2_pol 1803 . a c 1.000000000000000000000000 q30;ac5 DP=1334;AC=2;AF=0.0015 hxb2_pol 1804 . t a 1.000000000000000000000000 q30;ac5 DP=1323;AC=2;AF=0.0015 hxb2_pol 1805 . t a 2.000000000000000000000000 q30;ac5 DP=1332;AC=3;AF=0.0023 hxb2_pol 1806 . a g 2.000000000000000000000000 q30;ac5 DP=1328;AC=3;AF=0.0023 hxb2_pol 1806 . a t 2.000000000000000000000000 q30;ac5 DP=1328;AC=3;AF=0.0023 hxb2_pol 1807 . g a 1.000000000000000000000000 q30;ac5 DP=1316;AC=2;AF=0.0015 hxb2_pol 1808 . g a 2.000000000000000000000000 q30;ac5 DP=1327;AC=3;AF=0.0023 hxb2_pol 1809 . a g 2.000000000000000000000000 q30;ac5 DP=1311;AC=3;AF=0.0023 hxb2_pol 1810 . a t 8.000000000000000000000000 q30 DP=1325;AC=5;AF=0.0038 hxb2_pol 1811 . t a 2.000000000000000000000000 q30;ac5 DP=1324;AC=3;AF=0.0023 hxb2_pol 1811 . t c 8.000000000000000000000000 q30 DP=1324;AC=5;AF=0.0038 hxb2_pol 1812 . c a 2.000000000000000000000000 q30;ac5 DP=1326;AC=3;AF=0.0023 hxb2_pol 1812 . c t 2.000000000000000000000000 q30;ac5 DP=1326;AC=3;AF=0.0023 hxb2_pol 1813 . a c 2.000000000000000000000000 q30;ac5 DP=1325;AC=3;AF=0.0023 hxb2_pol 1813 . a t 1.000000000000000000000000 q30;ac5 DP=1325;AC=2;AF=0.0015 hxb2_pol 1814 . t a 5.000000000000000000000000 q30;ac5 DP=1304;AC=4;AF=0.0031 hxb2_pol 1815 . t c 5.000000000000000000000000 q30;ac5 DP=1320;AC=4;AF=0.0030 hxb2_pol 1816 . c a 5.000000000000000000000000 q30;ac5 DP=1319;AC=4;AF=0.0030 hxb2_pol 1817 . a c 2.000000000000000000000000 q30;ac5 DP=1300;AC=3;AF=0.0023 hxb2_pol 1818 . a g 5.000000000000000000000000 q30;ac5 DP=1319;AC=4;AF=0.0030 hxb2_pol 1819 . g a 8.000000000000000000000000 q30 DP=1318;AC=5;AF=0.0038 hxb2_pol 1819 . g c 8.000000000000000000000000 q30 DP=1318;AC=5;AF=0.0038 hxb2_pol 1820 . c a 2.000000000000000000000000 q30;ac5 DP=1315;AC=3;AF=0.0023 hxb2_pol 1820 . c g 8.000000000000000000000000 q30 DP=1315;AC=5;AF=0.0038 hxb2_pol 1821 . a c 38.00000000000000000000000 PASS DP=1312;AC=11;AF=0.0084 hxb2_pol 1822 . c a 26.00000000000000000000000 q30 DP=1305;AC=9;AF=0.0069 hxb2_pol 1823 . a c 12.00000000000000000000000 q30 DP=1300;AC=6;AF=0.0046 hxb2_pol 1825 . c a 8.000000000000000000000000 q30 DP=1293;AC=5;AF=0.0039 hxb2_pol 1828 . g a 5.000000000000000000000000 q30;ac5 DP=1303;AC=4;AF=0.0031 hxb2_pol 1832 . a c 5.000000000000000000000000 q30;ac5 DP=1268;AC=4;AF=0.0032 hxb2_pol 1835 . g a 1.000000000000000000000000 q30;ac5 DP=1286;AC=2;AF=0.0016 hxb2_pol 1835 . g t 2.000000000000000000000000 q30;ac5 DP=1286;AC=3;AF=0.0023 hxb2_pol 1836 . t g 8.000000000000000000000000 q30 DP=1283;AC=5;AF=0.0039 hxb2_pol 1837 . g t 2.000000000000000000000000 q30;ac5 DP=1290;AC=3;AF=0.0023 hxb2_pol 1838 . a g 3.000000000000000000000000 q30;ac5 DP=1275;AC=3;AF=0.0024 hxb2_pol 1839 . a t 5.000000000000000000000000 q30;ac5 DP=1286;AC=4;AF=0.0031 hxb2_pol 1840 . t a 1.000000000000000000000000 q30;ac5 DP=1288;AC=2;AF=0.0016 hxb2_pol 1840 . t c 5.000000000000000000000000 q30;ac5 DP=1288;AC=4;AF=0.0031 hxb2_pol 1841 . c a 5.000000000000000000000000 q30;ac5 DP=1288;AC=4;AF=0.0031 hxb2_pol 1841 . c t 2.000000000000000000000000 q30;ac5 DP=1288;AC=3;AF=0.0023 hxb2_pol 1842 . a c 8.000000000000000000000000 q30 DP=1288;AC=5;AF=0.0039 hxb2_pol 1842 . a g 2.000000000000000000000000 q30;ac5 DP=1288;AC=3;AF=0.0023 hxb2_pol 1843 . g a 16.00000000000000000000000 q30 DP=1285;AC=7;AF=0.0054 hxb2_pol 1844 . a g 12.00000000000000000000000 q30 DP=1285;AC=6;AF=0.0047 hxb2_pol 1845 . g a 2.000000000000000000000000 q30;ac5 DP=1280;AC=3;AF=0.0023 hxb2_pol 1845 . g t 1.000000000000000000000000 q30;ac5 DP=1280;AC=2;AF=0.0016 hxb2_pol 1853 . a t 1.000000000000000000000000 q30 DP=3009;AC=5;AF=0.0017 hxb2_pol 1854 . t c 2.000000000000000000000000 q30 DP=3002;AC=6;AF=0.0020 hxb2_pol 1856 . a c 2.000000000000000000000000 q30 DP=2978;AC=6;AF=0.0020 hxb2_pol 1880 . a g 8.000000000000000000000000 q30 DP=2387;AC=8;AF=0.0034 hxb2_pol 1882 . g a 18.00000000000000000000000 q30 DP=2386;AC=11;AF=0.0046 hxb2_pol 1883 . a g 6.000000000000000000000000 q30 DP=2344;AC=7;AF=0.0030 hxb2_pol 1917 . a g 4.000000000000000000000000 q30 DP=2780;AC=7;AF=0.0025 hxb2_pol 1918 . g a 2.000000000000000000000000 q30 DP=2773;AC=6;AF=0.0022 hxb2_pol 1919 . g a 6.000000000000000000000000 q30 DP=2779;AC=8;AF=0.0029 hxb2_pol 1920 . a g 6.000000000000000000000000 q30 DP=2767;AC=8;AF=0.0029 hxb2_pol 1921 . a t 6.000000000000000000000000 q30 DP=2781;AC=8;AF=0.0029 hxb2_pol 1922 . t a 11.00000000000000000000000 q30 DP=2768;AC=10;AF=0.0036 hxb2_pol 1923 . t g 2.000000000000000000000000 q30 DP=2778;AC=6;AF=0.0022 hxb2_pol 1924 . g t 4.000000000000000000000000 q30 DP=2759;AC=7;AF=0.0025 hxb2_pol 1925 . g a 2.000000000000000000000000 q30 DP=2784;AC=6;AF=0.0022 hxb2_pol 1926 . a g 17.00000000000000000000000 q30 DP=2782;AC=12;AF=0.0043 hxb2_pol 1927 . g a 6.000000000000000000000000 q30 DP=2776;AC=8;AF=0.0029 hxb2_pol 1929 . a g 4.000000000000000000000000 q30 DP=2744;AC=7;AF=0.0026 hxb2_pol 1933 . g a 1.000000000000000000000000 q30 DP=2787;AC=5;AF=0.0018 hxb2_pol 1944 . t a 1.000000000000000000000000 q30 DP=2790;AC=5;AF=0.0018 hxb2_pol 1949 . t a 1.000000000000000000000000 q30 DP=2787;AC=5;AF=0.0018 hxb2_pol 1972 . g a 4.000000000000000000000000 q30 DP=2765;AC=7;AF=0.0025 hxb2_pol 1973 . t g 4.000000000000000000000000 q30 DP=2767;AC=7;AF=0.0025 hxb2_pol 1974 . a t 2.000000000000000000000000 q30 DP=2768;AC=6;AF=0.0022 hxb2_pol 1975 . c a 1.000000000000000000000000 q30 DP=2766;AC=5;AF=0.0018 hxb2_pol 1976 . t c 1.000000000000000000000000 q30 DP=2767;AC=5;AF=0.0018 hxb2_pol 1977 . a t 2.000000000000000000000000 q30 DP=2763;AC=6;AF=0.0022 hxb2_pol 1978 . t a 1.000000000000000000000000 q30;ac5 DP=2564;AC=4;AF=0.0016 hxb2_pol 1982 . t a 4.000000000000000000000000 q30 DP=2758;AC=7;AF=0.0025 hxb2_pol 1983 . a g 2.000000000000000000000000 q30 DP=2759;AC=6;AF=0.0022 hxb2_pol 1984 . g a 8.000000000000000000000000 q30 DP=2764;AC=9;AF=0.0033 hxb2_pol 1985 . a t 1.000000000000000000000000 q30 DP=2770;AC=5;AF=0.0018 hxb2_pol 1986 . t g 1.000000000000000000000000 q30 DP=2776;AC=5;AF=0.0018 hxb2_pol 1988 . g a 1.000000000000000000000000 q30 DP=2785;AC=5;AF=0.0018 hxb2_pol 1990 . a t 2.000000000000000000000000 q30 DP=2787;AC=6;AF=0.0022 hxb2_pol 1991 . t a 2.000000000000000000000000 q30 DP=2786;AC=6;AF=0.0022 hxb2_pol 1998 . g a 1.000000000000000000000000 q30 DP=2779;AC=5;AF=0.0018 hxb2_pol 2000 . c g 1.000000000000000000000000 q30 DP=2737;AC=5;AF=0.0018 hxb2_pol 2003 . a c 2.000000000000000000000000 q30 DP=2769;AC=6;AF=0.0022 hxb2_pol 2005 . g a 2.000000000000000000000000 q30 DP=2786;AC=6;AF=0.0022 hxb2_pol 2011 . c a 1.000000000000000000000000 q30 DP=2789;AC=5;AF=0.0018 hxb2_pol 2028 . t a 1.000000000000000000000000 q30 DP=2768;AC=5;AF=0.0018 hxb2_pol 2029 . a t 1.000000000000000000000000 q30 DP=2763;AC=5;AF=0.0018 hxb2_pol 2031 . t a 1.000000000000000000000000 q30 DP=2754;AC=5;AF=0.0018 hxb2_pol 2052 . t a 1.000000000000000000000000 q30;ac5 DP=2588;AC=4;AF=0.0015 hxb2_pol 2055 . t a 6.000000000000000000000000 q30 DP=2716;AC=8;AF=0.0029 hxb2_pol 2056 . a t 6.000000000000000000000000 q30 DP=2691;AC=8;AF=0.0030 hxb2_pol 2057 . a c 9.000000000000000000000000 q30 DP=2715;AC=9;AF=0.0033 hxb2_pol 2058 . c a 9.000000000000000000000000 q30 DP=2700;AC=9;AF=0.0033 hxb2_pol 2059 . c t 15.00000000000000000000000 q30 DP=2715;AC=11;AF=0.0041 hxb2_pol 2060 . t g 14.00000000000000000000000 q30 DP=2720;AC=11;AF=0.0040 hxb2_pol 2061 . g c 6.000000000000000000000000 q30 DP=2723;AC=8;AF=0.0029 hxb2_pol 2063 . c a 1.000000000000000000000000 q30 DP=2723;AC=5;AF=0.0018 hxb2_pol 2064 . a c 6.000000000000000000000000 q30 DP=2721;AC=8;AF=0.0029 hxb2_pol 2072 . t a 2.000000000000000000000000 q30 DP=2717;AC=6;AF=0.0022 hxb2_pol 2076 . a c 1.000000000000000000000000 q30;ac5 DP=2551;AC=4;AF=0.0016 hxb2_pol 2079 . a g 12.00000000000000000000000 q30 DP=2674;AC=10;AF=0.0037 hxb2_pol 2080 . g a 46.00000000000000000000000 PASS DP=2668;AC=18;AF=0.0067 hxb2_pol 2081 . a g 19.00000000000000000000000 q30 DP=2614;AC=12;AF=0.0046 hxb2_pol 2083 . a t 3.000000000000000000000000 q30 DP=2675;AC=6;AF=0.0022 hxb2_pol 2084 . t a 22.00000000000000000000000 q30 DP=2676;AC=13;AF=0.0049 hxb2_pol 2085 . a g 3.000000000000000000000000 q30 DP=2690;AC=6;AF=0.0022 hxb2_pol 2085 . a t 4.000000000000000000000000 q30 DP=2690;AC=7;AF=0.0026 hxb2_pol 2086 . g a 3.000000000000000000000000 q30 DP=2692;AC=6;AF=0.0022 hxb2_pol 2086 . g t 1.000000000000000000000000 q30 DP=2692;AC=5;AF=0.0019 hxb2_pol 2087 . t a 1.000000000000000000000000 q30 DP=2693;AC=5;AF=0.0019 hxb2_pol 2088 . a g 1.000000000000000000000000 q30 DP=2690;AC=5;AF=0.0019 hxb2_pol 2103 . a t 1.000000000000000000000000 q30 DP=2683;AC=5;AF=0.0019 hxb2_pol 2104 . t g 1.000000000000000000000000 q30 DP=2680;AC=5;AF=0.0019 hxb2_pol 2105 . g t 6.000000000000000000000000 q30 DP=2675;AC=8;AF=0.0030 hxb2_pol 2106 . t c 1.000000000000000000000000 q30 DP=2668;AC=5;AF=0.0019 hxb2_pol 2111 . t c 3.000000000000000000000000 q30 DP=2653;AC=6;AF=0.0023 hxb2_pol 2112 . a t 7.000000000000000000000000 q30 DP=2527;AC=8;AF=0.0032 hxb2_pol 2115 . a g 7.000000000000000000000000 q30 DP=2649;AC=8;AF=0.0030 hxb2_pol 2116 . g a 19.00000000000000000000000 q30 DP=2618;AC=12;AF=0.0046 hxb2_pol 2117 . g a 9.000000000000000000000000 q30 DP=2650;AC=9;AF=0.0034 hxb2_pol 2118 . a g 69.00000000000000000000000 PASS DP=2645;AC=22;AF=0.0083 hxb2_pol 2119 . g a 69.00000000000000000000000 PASS DP=2644;AC=22;AF=0.0083 hxb2_pol 2120 . a g 9.000000000000000000000000 q30 DP=2615;AC=9;AF=0.0034 hxb2_pol 2121 . a g 3.000000000000000000000000 q30 DP=2658;AC=6;AF=0.0023 hxb2_pol 2122 . g a 3.000000000000000000000000 q30 DP=2661;AC=6;AF=0.0023 hxb2_pol 2122 . g c 1.000000000000000000000000 q30 DP=2661;AC=5;AF=0.0019 hxb2_pol 2123 . c g 7.000000000000000000000000 q30 DP=2629;AC=8;AF=0.0030 hxb2_pol 2134 . c a 3.000000000000000000000000 q30 DP=2644;AC=6;AF=0.0023 hxb2_pol 2149 . c t 1.000000000000000000000000 q30;ac5 DP=2587;AC=4;AF=0.0015 hxb2_pol 2150 . c a 7.000000000000000000000000 q30 DP=2615;AC=8;AF=0.0031 hxb2_pol 2151 . a g 7.000000000000000000000000 q30 DP=2615;AC=8;AF=0.0031 hxb2_pol 2152 . g a 1.000000000000000000000000 q30;ac5 DP=2583;AC=4;AF=0.0015 hxb2_pol 2153 . g a 3.000000000000000000000000 q30 DP=2610;AC=6;AF=0.0023 hxb2_pol 2154 . a g 5.000000000000000000000000 q30 DP=2574;AC=7;AF=0.0027 hxb2_pol 2155 . a t 12.00000000000000000000000 q30 DP=2606;AC=10;AF=0.0038 hxb2_pol 2156 . t a 42.00000000000000000000000 PASS DP=2598;AC=17;AF=0.0065 hxb2_pol 2157 . a t 28.00000000000000000000000 q30 DP=2593;AC=14;AF=0.0054 hxb2_pol 2158 . t a 3.000000000000000000000000 q30 DP=2602;AC=6;AF=0.0023 hxb2_pol 2158 . t g 7.000000000000000000000000 q30 DP=2602;AC=8;AF=0.0031 hxb2_pol 2159 . g t 5.000000000000000000000000 q30 DP=2557;AC=7;AF=0.0027 hxb2_pol 2160 . g c 3.000000000000000000000000 q30 DP=2596;AC=6;AF=0.0023 hxb2_pol 2161 . c a 3.000000000000000000000000 q30 DP=2595;AC=6;AF=0.0023 hxb2_pol 2161 . c g 1.000000000000000000000000 q30 DP=2595;AC=5;AF=0.0019 hxb2_pol 2162 . a c 7.000000000000000000000000 q30 DP=2566;AC=8;AF=0.0031 hxb2_pol 2163 . a c 5.000000000000000000000000 q30 DP=2591;AC=7;AF=0.0027 hxb2_pol 2164 . c a 3.000000000000000000000000 q30 DP=2578;AC=6;AF=0.0023 hxb2_pol 2164 . c t 7.000000000000000000000000 q30 DP=2578;AC=8;AF=0.0031 hxb2_pol 2165 . t a 5.000000000000000000000000 q30 DP=2576;AC=7;AF=0.0027 hxb2_pol 2165 . t c 1.000000000000000000000000 q30;ac5 DP=2576;AC=4;AF=0.0016 hxb2_pol 2166 . a g 1.000000000000000000000000 q30;ac5 DP=2575;AC=4;AF=0.0016 hxb2_pol 2167 . g a 3.000000000000000000000000 q30 DP=2573;AC=6;AF=0.0023 hxb2_pol 2168 . a t 1.000000000000000000000000 q30;ac5 DP=2582;AC=4;AF=0.0015 hxb2_pol 2171 . g t 1.000000000000000000000000 q30;ac5 DP=2565;AC=4;AF=0.0016 hxb2_pol 2174 . c a 1.000000000000000000000000 q30;ac5 DP=2560;AC=4;AF=0.0016 hxb2_pol 2175 . a c 3.000000000000000000000000 q30 DP=2553;AC=6;AF=0.0024 hxb2_pol 2176 . c a 1.000000000000000000000000 q30;ac5 DP=2544;AC=4;AF=0.0016 hxb2_pol 2177 . a c 1.000000000000000000000000 q30;ac5 DP=2545;AC=4;AF=0.0016 hxb2_pol 2178 . t a 2.000000000000000000000000 q30 DP=2455;AC=5;AF=0.0020 hxb2_pol 2180 . t a 13.00000000000000000000000 q30 DP=2524;AC=10;AF=0.0040 hxb2_pol 2181 . a g 25.00000000000000000000000 q30 DP=2500;AC=13;AF=0.0052 hxb2_pol 2181 . a t 44.00000000000000000000000 PASS DP=2500;AC=17;AF=0.0068 hxb2_pol 2182 . g a 100.0000000000000000000000 PASS DP=2498;AC=34;AF=0.0136 hxb2_pol 2183 . a g 75.00000000000000000000000 PASS DP=2448;AC=22;AF=0.0090 hxb2_pol 2184 . a g 45.00000000000000000000000 PASS DP=2453;AC=17;AF=0.0069 hxb2_pol 2185 . g a 83.00000000000000000000000 PASS DP=2403;AC=23;AF=0.0096 hxb2_pol 2186 . g a 96.00000000000000000000000 PASS DP=2419;AC=25;AF=0.0103 hxb2_pol 2187 . a g 100 PASS DP=2283;AC=25;AF=0.0110 hxb2_pol 2190 . a g 76.00000000000000000000000 PASS DP=2411;AC=22;AF=0.0091 hxb2_pol 2191 . g a 52.00000000000000000000000 PASS DP=2398;AC=18;AF=0.0075 hxb2_pol 2191 . g t 76.00000000000000000000000 PASS DP=2398;AC=22;AF=0.0092 hxb2_pol 2192 . t g 47.00000000000000000000000 PASS DP=2371;AC=17;AF=0.0072 hxb2_pol 2193 . t a 52.00000000000000000000000 PASS DP=2406;AC=18;AF=0.0075 hxb2_pol 2194 . a t 100 PASS DP=2401;AC=26;AF=0.0108 hxb2_pol 2195 . t a 8.000000000000000000000000 q30 DP=2409;AC=8;AF=0.0033 hxb2_pol 2195 . t c 46.00000000000000000000000 PASS DP=2409;AC=17;AF=0.0071 hxb2_pol 2196 . c t 14.00000000000000000000000 q30 DP=2385;AC=10;AF=0.0042 hxb2_pol 2197 . c t 18.00000000000000000000000 q30 DP=2409;AC=11;AF=0.0046 hxb2_pol 2198 . t g 8.000000000000000000000000 q30 DP=2405;AC=8;AF=0.0033 hxb2_pol 2199 . g t 1.000000000000000000000000 q30;ac5 DP=2361;AC=4;AF=0.0017 hxb2_pol 2200 . g t 22.00000000000000000000000 q30 DP=2403;AC=12;AF=0.0050 hxb2_pol 2201 . t a 8.000000000000000000000000 q30 DP=2391;AC=8;AF=0.0033 hxb2_pol 2202 . a g 14.00000000000000000000000 q30 DP=2386;AC=10;AF=0.0042 hxb2_pol 2203 . g c 8.000000000000000000000000 q30 DP=2402;AC=8;AF=0.0033 hxb2_pol 2204 . c a 8.000000000000000000000000 q30 DP=2401;AC=8;AF=0.0033 hxb2_pol 2205 . a g 4.000000000000000000000000 q30 DP=2399;AC=6;AF=0.0025 hxb2_pol 2206 . g t 4.000000000000000000000000 q30 DP=2385;AC=6;AF=0.0025 hxb2_pol 2212 . g t 11.00000000000000000000000 q30 DP=2371;AC=9;AF=0.0038 hxb2_pol 2213 . t g 1.000000000000000000000000 q30;ac5 DP=2374;AC=4;AF=0.0017 hxb2_pol 2214 . a t 4.000000000000000000000000 q30 DP=2362;AC=6;AF=0.0025 hxb2_pol 2215 . g a 1.000000000000000000000000 q30;ac5 DP=2381;AC=4;AF=0.0017 hxb2_pol 2216 . c g 1.000000000000000000000000 q30;ac5 DP=2334;AC=4;AF=0.0017 hxb2_pol 2219 . g a 4.000000000000000000000000 q30 DP=2357;AC=6;AF=0.0025 hxb2_pol 2220 . t g 6.000000000000000000000000 q30 DP=2352;AC=7;AF=0.0030 hxb2_pol 2221 . g t 1.000000000000000000000000 q30;ac5 DP=2324;AC=4;AF=0.0017 hxb2_pol 2222 . g a 8.000000000000000000000000 q30 DP=2367;AC=8;AF=0.0034 hxb2_pol 2223 . a g 1.000000000000000000000000 q30;ac5 DP=2365;AC=4;AF=0.0017 hxb2_pol 2223 . a t 4.000000000000000000000000 q30 DP=2365;AC=6;AF=0.0025 hxb2_pol 2224 . t a 27.00000000000000000000000 q30 DP=2347;AC=13;AF=0.0055 hxb2_pol 2225 . a t 8.000000000000000000000000 q30 DP=2348;AC=8;AF=0.0034 hxb2_pol 2226 . t a 11.00000000000000000000000 q30 DP=2350;AC=9;AF=0.0038 hxb2_pol 2227 . a t 19.00000000000000000000000 q30 DP=2342;AC=11;AF=0.0047 hxb2_pol 2228 . t a 15.00000000000000000000000 q30 DP=2337;AC=10;AF=0.0043 hxb2_pol 2229 . a g 9.000000000000000000000000 q30 DP=2334;AC=8;AF=0.0034 hxb2_pol 2230 . g a 12.00000000000000000000000 q30 DP=2335;AC=9;AF=0.0039 hxb2_pol 2232 . a g 15.00000000000000000000000 q30 DP=2343;AC=10;AF=0.0043 hxb2_pol 2233 . g c 19.00000000000000000000000 q30 DP=2338;AC=11;AF=0.0047 hxb2_pol 2234 . c a 6.000000000000000000000000 q30 DP=2333;AC=7;AF=0.0030 hxb2_pol 2234 . c g 4.000000000000000000000000 q30 DP=2333;AC=6;AF=0.0026 hxb2_pol 2235 . a c 9.000000000000000000000000 q30 DP=2331;AC=8;AF=0.0034 hxb2_pol 2235 . a g 12.00000000000000000000000 q30 DP=2331;AC=9;AF=0.0039 hxb2_pol 2236 . g a 79.00000000000000000000000 PASS DP=2313;AC=22;AF=0.0095 hxb2_pol 2237 . a g 23.00000000000000000000000 q30 DP=2287;AC=12;AF=0.0052 hxb2_pol 2238 . a g 23.00000000000000000000000 q30 DP=2317;AC=12;AF=0.0052 hxb2_pol 2239 . g a 54.00000000000000000000000 PASS DP=2298;AC=18;AF=0.0078 hxb2_pol 2239 . g t 28.00000000000000000000000 q30 DP=2298;AC=13;AF=0.0057 hxb2_pol 2240 . t g 67.00000000000000000000000 PASS DP=2274;AC=20;AF=0.0088 hxb2_pol 2241 . t a 9.000000000000000000000000 q30 DP=2290;AC=8;AF=0.0035 hxb2_pol 2242 . a t 81.00000000000000000000000 PASS DP=2267;AC=22;AF=0.0097 hxb2_pol 2243 . t a 24.00000000000000000000000 q30 DP=2246;AC=12;AF=0.0053 hxb2_pol 2244 . t c 12.00000000000000000000000 q30 DP=2278;AC=9;AF=0.0040 hxb2_pol 2245 . c t 34.00000000000000000000000 PASS DP=2237;AC=14;AF=0.0063 hxb2_pol 2246 . c a 12.00000000000000000000000 q30 DP=2268;AC=9;AF=0.0040 hxb2_pol 2247 . a g 6.000000000000000000000000 q30 DP=2260;AC=7;AF=0.0031 hxb2_pol 2248 . g a 1.000000000000000000000000 q30;ac5 DP=2249;AC=4;AF=0.0018 hxb2_pol 2249 . c g 2.000000000000000000000000 q30 DP=2243;AC=5;AF=0.0022 hxb2_pol 2250 . a c 7.000000000000000000000000 q30 DP=2225;AC=7;AF=0.0031 hxb2_pol 2250 . a g 1.000000000000000000000000 q30;ac5 DP=2225;AC=4;AF=0.0018 hxb2_pol 2251 . g a 91.00000000000000000000000 PASS DP=2181;AC=23;AF=0.0105 hxb2_pol 2252 . a g 66.00000000000000000000000 PASS DP=2088;AC=19;AF=0.0091 hxb2_pol 2254 . a c 17.00000000000000000000000 q30 DP=2121;AC=10;AF=0.0047 hxb2_pol 2255 . c a 100 PASS DP=2094;AC=24;AF=0.0115 hxb2_pol 2256 . a c 37.00000000000000000000000 PASS DP=2093;AC=14;AF=0.0067 hxb2_pol 2256 . a g 14.00000000000000000000000 q30 DP=2093;AC=9;AF=0.0043 hxb2_pol 2257 . g a 62.00000000000000000000000 PASS DP=2019;AC=18;AF=0.0089 hxb2_pol 2259 . g c 19.00000000000000000000000 q30 DP=1987;AC=10;AF=0.0050 hxb2_pol 2260 . c a 19.00000000000000000000000 q30 DP=1977;AC=10;AF=0.0051 hxb2_pol 2260 . c g 8.000000000000000000000000 q30 DP=1977;AC=7;AF=0.0035 hxb2_pol 2261 . a c 19.00000000000000000000000 q30 DP=1973;AC=10;AF=0.0051 hxb2_pol 2261 . a g 19.00000000000000000000000 q30 DP=1973;AC=10;AF=0.0051 hxb2_pol 2262 . g a 20.00000000000000000000000 q30 DP=1954;AC=10;AF=0.0051 hxb2_pol 2263 . g a 100 PASS DP=1960;AC=29;AF=0.0148 hxb2_pol 2264 . a g 100.0000000000000000000000 PASS DP=1943;AC=32;AF=0.0165 hxb2_pol 2266 . a c 13.00000000000000000000000 q30 DP=1865;AC=8;AF=0.0043 hxb2_pol 2267 . c a 2.000000000000000000000000 q30;ac5 DP=1753;AC=4;AF=0.0023 hxb2_pol 2273 . a t 3.000000000000000000000000 q30;ac5 DP=1255;AC=3;AF=0.0024 hxb2_pol 2274 . t a 9.000000000000000000000000 q30;ac5 DP=894;AC=4;AF=0.0045 hxb2_pol 2277 . t c 9.000000000000000000000000 q30;ac5 DP=573;AC=3;AF=0.0052 hxb2_pol 2278 . c t 54.00000000000000000000000 PASS DP=557;AC=9;AF=0.0162 hxb2_pol 2279 . t c 22.00000000000000000000000 q30 DP=534;AC=5;AF=0.0094 hxb2_pol 2282 . t a 29.00000000000000000000000 q30 DP=534;AC=6;AF=0.0112 hxb2_pol 2283 . a t 15.00000000000000000000000 q30;ac5 DP=532;AC=4;AF=0.0075 hxb2_pol 2286 . a t 8.000000000000000000000000 q30;ac5 DP=586;AC=3;AF=0.0051 hxb2_pol 2287 . t a 1.000000000000000000000000 q30;ac5 DP=592;AC=1;AF=0.0017 hxb2_pol 2288 . t a 8.000000000000000000000000 q30;ac5 DP=626;AC=3;AF=0.0048 hxb2_pol 2289 . a g 8.000000000000000000000000 q30;ac5 DP=646;AC=3;AF=0.0046 hxb2_pol 2290 . g c 8.000000000000000000000000 q30;ac5 DP=650;AC=3;AF=0.0046 hxb2_pol 2291 . c a 8.000000000000000000000000 q30;ac5 DP=649;AC=3;AF=0.0046 hxb2_pol 2292 . a g 4.000000000000000000000000 q30;ac5 DP=646;AC=2;AF=0.0031 hxb2_pol 2297 . g a 1.000000000000000000000000 q30;ac5 DP=639;AC=1;AF=0.0016 hxb2_pol 2298 . a g 1.000000000000000000000000 q30;ac5 DP=638;AC=1;AF=0.0016 hxb2_pol 2300 . g t 4.000000000000000000000000 q30;ac5 DP=631;AC=2;AF=0.0032 hxb2_pol 2302 . c g 4.000000000000000000000000 q30;ac5 DP=621;AC=2;AF=0.0032 hxb2_pol 2304 . a c 8.000000000000000000000000 q30;ac5 DP=609;AC=3;AF=0.0049 hxb2_pol 2305 . g a 8.000000000000000000000000 q30;ac5 DP=606;AC=3;AF=0.0050 hxb2_pol 2306 . t g 8.000000000000000000000000 q30;ac5 DP=603;AC=3;AF=0.0050 hxb2_pol 2307 . a t 4.000000000000000000000000 q30;ac5 DP=563;AC=2;AF=0.0036 hxb2_pol 2312 . c a 4.000000000000000000000000 q30;ac5 DP=597;AC=2;AF=0.0034 hxb2_pol 2313 . a c 4.000000000000000000000000 q30;ac5 DP=593;AC=2;AF=0.0034 hxb2_pol 2315 . t a 4.000000000000000000000000 q30;ac5 DP=603;AC=2;AF=0.0033 hxb2_pol 2316 . a c 1.000000000000000000000000 q30;ac5 DP=606;AC=1;AF=0.0017 hxb2_pol 2316 . a t 1.000000000000000000000000 q30;ac5 DP=606;AC=1;AF=0.0017 hxb2_pol 2317 . c a 1.000000000000000000000000 q30;ac5 DP=605;AC=1;AF=0.0017 hxb2_pol 2327 . a t 1.000000000000000000000000 q30;ac5 DP=596;AC=1;AF=0.0017 hxb2_pol 2330 . g c 1.000000000000000000000000 q30;ac5 DP=588;AC=1;AF=0.0017 hxb2_pol 2331 . c a 1.000000000000000000000000 q30;ac5 DP=585;AC=1;AF=0.0017 hxb2_pol 2332 . a c 1.000000000000000000000000 q30;ac5 DP=583;AC=1;AF=0.0017 hxb2_pol 2332 . a g 1.000000000000000000000000 q30;ac5 DP=583;AC=1;AF=0.0017 hxb2_pol 2333 . g a 1.000000000000000000000000 q30;ac5 DP=581;AC=1;AF=0.0017 hxb2_pol 2333 . g c 1.000000000000000000000000 q30;ac5 DP=581;AC=1;AF=0.0017 hxb2_pol 2334 . c g 1.000000000000000000000000 q30;ac5 DP=577;AC=1;AF=0.0017 hxb2_pol 2335 . a c 1.000000000000000000000000 q30;ac5 DP=576;AC=1;AF=0.0017 hxb2_pol 2337 . t a 1.000000000000000000000000 q30;ac5 DP=559;AC=1;AF=0.0018 hxb2_pol 2345 . g t 1.000000000000000000000000 q30;ac5 DP=555;AC=1;AF=0.0018 hxb2_pol 2346 . t g 4.000000000000000000000000 q30;ac5 DP=554;AC=2;AF=0.0036 hxb2_pol 2347 . g c 1.000000000000000000000000 q30;ac5 DP=553;AC=1;AF=0.0018 hxb2_pol 2348 . c t 1.000000000000000000000000 q30;ac5 DP=552;AC=1;AF=0.0018 hxb2_pol 2349 . t a 1.000000000000000000000000 q30;ac5 DP=549;AC=1;AF=0.0018 hxb2_pol 2350 . a c 1.000000000000000000000000 q30;ac5 DP=547;AC=1;AF=0.0018 hxb2_pol 2351 . c g 1.000000000000000000000000 q30;ac5 DP=546;AC=1;AF=0.0018 hxb2_pol 2355 . t a 1.000000000000000000000000 q30;ac5 DP=538;AC=1;AF=0.0019 hxb2_pol 2356 . a g 1.000000000000000000000000 q30;ac5 DP=535;AC=1;AF=0.0019 hxb2_pol 2356 . a t 1.000000000000000000000000 q30;ac5 DP=535;AC=1;AF=0.0019 hxb2_pol 2357 . g a 5.000000000000000000000000 q30;ac5 DP=523;AC=2;AF=0.0038 hxb2_pol 2359 . g c 1.000000000000000000000000 q30;ac5 DP=525;AC=1;AF=0.0019 hxb2_pol 2365 . t c 1.000000000000000000000000 q30;ac5 DP=507;AC=1;AF=0.0020 hxb2_pol 2366 . g t 1.000000000000000000000000 q30;ac5 DP=506;AC=1;AF=0.0020 hxb2_pol 2367 . t g 1.000000000000000000000000 q30;ac5 DP=502;AC=1;AF=0.0020 hxb2_pol 2369 . g t 1.000000000000000000000000 q30;ac5 DP=500;AC=1;AF=0.0020 hxb2_pol 2372 . g t 1.000000000000000000000000 q30;ac5 DP=493;AC=1;AF=0.0020 hxb2_pol 2374 . g c 1.000000000000000000000000 q30;ac5 DP=500;AC=1;AF=0.0020 hxb2_pol 2375 . c g 1.000000000000000000000000 q30;ac5 DP=498;AC=1;AF=0.0020 hxb2_pol 2391 . a t 5.000000000000000000000000 q30;ac5 DP=468;AC=2;AF=0.0043 hxb2_pol 2394 . t g 2.000000000000000000000000 q30;ac5 DP=462;AC=1;AF=0.0022 hxb2_pol 2396 . g a 2.000000000000000000000000 q30;ac5 DP=461;AC=1;AF=0.0022 hxb2_pol 2398 . a t 2.000000000000000000000000 q30;ac5 DP=457;AC=1;AF=0.0022 hxb2_pol 2400 . t c 2.000000000000000000000000 q30;ac5 DP=450;AC=1;AF=0.0022 hxb2_pol 2404 . t c 2.000000000000000000000000 q30;ac5 DP=442;AC=1;AF=0.0023 hxb2_pol 2405 . a t 2.000000000000000000000000 q30;ac5 DP=442;AC=1;AF=0.0023 hxb2_pol 2406 . c a 2.000000000000000000000000 q30;ac5 DP=440;AC=1;AF=0.0023 hxb2_pol 2407 . a c 2.000000000000000000000000 q30;ac5 DP=439;AC=1;AF=0.0023 hxb2_pol 2409 . t a 2.000000000000000000000000 q30;ac5 DP=438;AC=1;AF=0.0023 hxb2_pol 2410 . c t 2.000000000000000000000000 q30;ac5 DP=424;AC=1;AF=0.0024 hxb2_pol 2413 . c a 2.000000000000000000000000 q30;ac5 DP=432;AC=1;AF=0.0023 hxb2_pol 2414 . a c 2.000000000000000000000000 q30;ac5 DP=423;AC=1;AF=0.0024 hxb2_pol 2416 . a g 2.000000000000000000000000 q30;ac5 DP=428;AC=1;AF=0.0023 hxb2_pol 2417 . g a 2.000000000000000000000000 q30;ac5 DP=426;AC=1;AF=0.0023 hxb2_pol 2417 . g t 2.000000000000000000000000 q30;ac5 DP=426;AC=1;AF=0.0023 hxb2_pol 2418 . t c 2.000000000000000000000000 q30;ac5 DP=425;AC=1;AF=0.0024 hxb2_pol 2419 . c a 2.000000000000000000000000 q30;ac5 DP=423;AC=1;AF=0.0024 hxb2_pol 2421 . a g 2.000000000000000000000000 q30;ac5 DP=419;AC=1;AF=0.0024 hxb2_pol 2451 . a t 7.000000000000000000000000 q30;ac5 DP=367;AC=2;AF=0.0054 hxb2_pol 2454 . g a 2.000000000000000000000000 q30;ac5 DP=365;AC=1;AF=0.0027 hxb2_pol 2455 . a g 2.000000000000000000000000 q30;ac5 DP=355;AC=1;AF=0.0028 hxb2_pol 2533 . a t 10.00000000000000000000000 q30;ac5 DP=235;AC=2;AF=0.0085 hxb2_pol 2536 . a g 4.000000000000000000000000 q30;ac5 DP=230;AC=1;AF=0.0043 hxb2_pol 2537 . g a 19.00000000000000000000000 q30;ac5 DP=226;AC=3;AF=0.0133 hxb2_pol 2538 . a g 28.00000000000000000000000 q30;ac5 DP=223;AC=4;AF=0.0179 hxb2_pol 2541 . a g 11.00000000000000000000000 q30;ac5 DP=220;AC=2;AF=0.0091 hxb2_pol 2542 . g a 40.00000000000000000000000 PASS DP=204;AC=5;AF=0.0245 hxb2_pol 2547 . g a 28.00000000000000000000000 q30;ac5 DP=229;AC=4;AF=0.0175 hxb2_pol 2548 . a g 3.000000000000000000000000 q30;ac5 DP=262;AC=1;AF=0.0038 hxb2_pol 2548 . a t 35.00000000000000000000000 PASS DP=262;AC=5;AF=0.0191 hxb2_pol 2549 . t a 33.00000000000000000000000 PASS DP=294;AC=5;AF=0.0170 hxb2_pol 2550 . t g 24.00000000000000000000000 q30;ac5 DP=298;AC=4;AF=0.0134 hxb2_pol 2551 . g t 32.00000000000000000000000 PASS DP=304;AC=5;AF=0.0164 hxb2_pol 2569 . g a 12.00000000000000000000000 q30;ac5 DP=411;AC=3;AF=0.0073 hxb2_pol 2570 . a g 2.000000000000000000000000 q30;ac5 DP=404;AC=1;AF=0.0025 hxb2_pol 2572 . a g 2.000000000000000000000000 q30;ac5 DP=408;AC=1;AF=0.0025 hxb2_pol 2573 . g a 2.000000000000000000000000 q30;ac5 DP=407;AC=1;AF=0.0025 hxb2_pol 2588 . t a 2.000000000000000000000000 q30;ac5 DP=385;AC=1;AF=0.0026 hxb2_pol 2589 . a t 2.000000000000000000000000 q30;ac5 DP=382;AC=1;AF=0.0026 hxb2_pol 2590 . g a 2.000000000000000000000000 q30;ac5 DP=380;AC=1;AF=0.0026 hxb2_pol 2591 . c g 2.000000000000000000000000 q30;ac5 DP=380;AC=1;AF=0.0026 hxb2_pol 2592 . a c 2.000000000000000000000000 q30;ac5 DP=377;AC=1;AF=0.0027 hxb2_pol 2594 . c a 2.000000000000000000000000 q30;ac5 DP=378;AC=1;AF=0.0026 hxb2_pol 2605 . a c 2.000000000000000000000000 q30;ac5 DP=363;AC=1;AF=0.0028 hxb2_pol 2606 . c t 2.000000000000000000000000 q30;ac5 DP=362;AC=1;AF=0.0028 hxb2_pol 2607 . t a 2.000000000000000000000000 q30;ac5 DP=362;AC=1;AF=0.0028 hxb2_pol 2622 . a c 7.000000000000000000000000 q30;ac5 DP=346;AC=2;AF=0.0058 hxb2_pol 2623 . c a 21.00000000000000000000000 q30;ac5 DP=346;AC=4;AF=0.0116 hxb2_pol 2624 . a c 22.00000000000000000000000 q30;ac5 DP=342;AC=4;AF=0.0117 hxb2_pol 2626 . a t 7.000000000000000000000000 q30;ac5 DP=344;AC=2;AF=0.0058 hxb2_pol 2627 . t a 14.00000000000000000000000 q30;ac5 DP=347;AC=3;AF=0.0086 hxb2_pol 2628 . t a 7.000000000000000000000000 q30;ac5 DP=350;AC=2;AF=0.0057 hxb2_pol 2629 . a c 7.000000000000000000000000 q30;ac5 DP=349;AC=2;AF=0.0057 hxb2_pol 2629 . a t 14.00000000000000000000000 q30;ac5 DP=349;AC=3;AF=0.0086 hxb2_pol 2630 . c a 30.00000000000000000000000 PASS DP=348;AC=5;AF=0.0144 hxb2_pol 2631 . a c 14.00000000000000000000000 q30;ac5 DP=327;AC=3;AF=0.0092 hxb2_pol 2635 . a t 7.000000000000000000000000 q30;ac5 DP=344;AC=2;AF=0.0058 hxb2_pol 2636 . t a 2.000000000000000000000000 q30;ac5 DP=343;AC=1;AF=0.0029 hxb2_pol 2637 . t c 7.000000000000000000000000 q30;ac5 DP=344;AC=2;AF=0.0058 hxb2_pol 2638 . c a 7.000000000000000000000000 q30;ac5 DP=344;AC=2;AF=0.0058 hxb2_pol 2638 . c t 7.000000000000000000000000 q30;ac5 DP=344;AC=2;AF=0.0058 hxb2_pol 2639 . a c 8.000000000000000000000000 q30;ac5 DP=333;AC=2;AF=0.0060 hxb2_pol 2642 . a t 14.00000000000000000000000 q30;ac5 DP=342;AC=3;AF=0.0088 hxb2_pol 2650 . g t 2.000000000000000000000000 q30;ac5 DP=338;AC=1;AF=0.0030 hxb2_pol 2651 . t g 2.000000000000000000000000 q30;ac5 DP=335;AC=1;AF=0.0030 hxb2_pol 2654 . a t 8.000000000000000000000000 q30;ac5 DP=332;AC=2;AF=0.0060 hxb2_pol 2655 . t a 2.000000000000000000000000 q30;ac5 DP=332;AC=1;AF=0.0030 hxb2_pol 2657 . a t 3.000000000000000000000000 q30;ac5 DP=331;AC=1;AF=0.0030 hxb2_pol 2658 . c a 3.000000000000000000000000 q30;ac5 DP=330;AC=1;AF=0.0030 hxb2_pol 2659 . a c 3.000000000000000000000000 q30;ac5 DP=329;AC=1;AF=0.0030 hxb2_pol 2660 . g a 3.000000000000000000000000 q30;ac5 DP=323;AC=1;AF=0.0031 hxb2_pol 2792 . g a 7.000000000000000000000000 q30;dp100;ac5 DP=93;AC=1;AF=0.0108