Mercurial > repos > nml > refseq_masher

annotate test-data/SRR1203042_1-head4000-contains.tab @ 1:2c1cb37a3ffe draft

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planemo upload for repository https://github.com/phac-nml/refseq_masher commit e83730c5df84a960af58ff09db7eb09d11df2398
author nml
date Wed, 08 May 2019 09:15:56 -0400
parents 26df66c32861
children
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26df66c32861 planemo upload commit 80c22275be05e29208e991019309dfffa9704f39
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1 sample top_taxonomy_name identity shared_hashes median_multiplicity pvalue full_taxonomy taxonomic_subspecies taxonomic_species taxonomic_genus taxonomic_family taxonomic_order taxonomic_class taxonomic_phylum taxonomic_superkingdom subspecies serovar plasmid bioproject biosample taxid assembly_accession match_id match_comment
26df66c32861 planemo upload commit 80c22275be05e29208e991019309dfffa9704f39
nml
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2 SRR1203042-head4000 Salmonella enterica subsp. enterica serovar Typhimurium 0.934797 136/400 1 0.0 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; enterica; subsp. enterica; serovar Typhimurium Salmonella enterica subsp. enterica Salmonella enterica Salmonella Enterobacteriaceae Enterobacterales Gammaproteobacteria Proteobacteria Bacteria enterica Typhimurium PRJNA188943 90371 ./rcn/refseq-NG-90371-PRJNA188943-.-.-.-Salmonella_enterica_subsp._enterica_serovar_Typhimurium.fna
26df66c32861 planemo upload commit 80c22275be05e29208e991019309dfffa9704f39
nml
parents:
diff changeset
3 SRR1203042-head4000 Salmonella enterica subsp. enterica serovar Typhimurium 0.934797 136/400 1 0.0 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; enterica; subsp. enterica; serovar Typhimurium Salmonella enterica subsp. enterica Salmonella enterica Salmonella Enterobacteriaceae Enterobacterales Gammaproteobacteria Proteobacteria Bacteria enterica Typhimurium PRJNA188943 90371 ./rcn/refseq-NR-90371-PRJNA188943-.-.-.-Salmonella_enterica_subsp._enterica_serovar_Typhimurium.fna
26df66c32861 planemo upload commit 80c22275be05e29208e991019309dfffa9704f39
nml
parents:
diff changeset
4 SRR1203042-head4000 Salmonella enterica subsp. enterica serovar Choleraesuis 0.9326110000000001 131/400 1 0.0 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; enterica; subsp. enterica; serovar Choleraesuis Salmonella enterica subsp. enterica Salmonella enterica Salmonella Enterobacteriaceae Enterobacterales Gammaproteobacteria Proteobacteria Bacteria enterica Choleraesuis PRJNA188943 119912 ./rcn/refseq-NG-119912-PRJNA188943-.-.-.-Salmonella_enterica_subsp._enterica_serovar_Choleraesuis.fna
26df66c32861 planemo upload commit 80c22275be05e29208e991019309dfffa9704f39
nml
parents:
diff changeset
5 SRR1203042-head4000 Salmonella enterica subsp. enterica serovar Choleraesuis 0.9326110000000001 131/400 1 0.0 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; enterica; subsp. enterica; serovar Choleraesuis Salmonella enterica subsp. enterica Salmonella enterica Salmonella Enterobacteriaceae Enterobacterales Gammaproteobacteria Proteobacteria Bacteria enterica Choleraesuis PRJNA188943 119912 ./rcn/refseq-NR-119912-PRJNA188943-.-.-.-Salmonella_enterica_subsp._enterica_serovar_Choleraesuis.fna
26df66c32861 planemo upload commit 80c22275be05e29208e991019309dfffa9704f39
nml
parents:
diff changeset
6 SRR1203042-head4000 Atlantibacter hermannii 0.9224829999999999 110/400 1 0.0 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Atlantibacter; hermannii Atlantibacter hermannii Atlantibacter Enterobacteriaceae Enterobacterales Gammaproteobacteria Proteobacteria Bacteria PRJNA33175 565 ./rcn/refseq-NR-565-PRJNA33175-.-.-.-Escherichia_hermannii.fna