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view test-data/SRR1203042_1-head4000-contains.tab @ 1:2c1cb37a3ffe draft

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planemo upload for repository https://github.com/phac-nml/refseq_masher commit e83730c5df84a960af58ff09db7eb09d11df2398
author nml
date Wed, 08 May 2019 09:15:56 -0400
parents 26df66c32861
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sample	top_taxonomy_name	identity	shared_hashes	median_multiplicity	pvalue	full_taxonomy	taxonomic_subspecies	taxonomic_species	taxonomic_genus	taxonomic_family	taxonomic_order	taxonomic_class	taxonomic_phylum	taxonomic_superkingdom	subspecies	serovar	plasmid	bioproject	biosample	taxid	assembly_accession	match_id	match_comment
SRR1203042-head4000	Salmonella enterica subsp. enterica serovar Typhimurium	0.934797	136/400	1	0.0	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; enterica; subsp. enterica; serovar Typhimurium	Salmonella enterica subsp. enterica	Salmonella enterica	Salmonella	Enterobacteriaceae	Enterobacterales	Gammaproteobacteria	Proteobacteria	Bacteria	enterica	Typhimurium		PRJNA188943		90371		./rcn/refseq-NG-90371-PRJNA188943-.-.-.-Salmonella_enterica_subsp._enterica_serovar_Typhimurium.fna	
SRR1203042-head4000	Salmonella enterica subsp. enterica serovar Typhimurium	0.934797	136/400	1	0.0	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; enterica; subsp. enterica; serovar Typhimurium	Salmonella enterica subsp. enterica	Salmonella enterica	Salmonella	Enterobacteriaceae	Enterobacterales	Gammaproteobacteria	Proteobacteria	Bacteria	enterica	Typhimurium		PRJNA188943		90371		./rcn/refseq-NR-90371-PRJNA188943-.-.-.-Salmonella_enterica_subsp._enterica_serovar_Typhimurium.fna	
SRR1203042-head4000	Salmonella enterica subsp. enterica serovar Choleraesuis	0.9326110000000001	131/400	1	0.0	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; enterica; subsp. enterica; serovar Choleraesuis	Salmonella enterica subsp. enterica	Salmonella enterica	Salmonella	Enterobacteriaceae	Enterobacterales	Gammaproteobacteria	Proteobacteria	Bacteria	enterica	Choleraesuis		PRJNA188943		119912		./rcn/refseq-NG-119912-PRJNA188943-.-.-.-Salmonella_enterica_subsp._enterica_serovar_Choleraesuis.fna	
SRR1203042-head4000	Salmonella enterica subsp. enterica serovar Choleraesuis	0.9326110000000001	131/400	1	0.0	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; enterica; subsp. enterica; serovar Choleraesuis	Salmonella enterica subsp. enterica	Salmonella enterica	Salmonella	Enterobacteriaceae	Enterobacterales	Gammaproteobacteria	Proteobacteria	Bacteria	enterica	Choleraesuis		PRJNA188943		119912		./rcn/refseq-NR-119912-PRJNA188943-.-.-.-Salmonella_enterica_subsp._enterica_serovar_Choleraesuis.fna	
SRR1203042-head4000	Atlantibacter hermannii	0.9224829999999999	110/400	1	0.0	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Atlantibacter; hermannii		Atlantibacter hermannii	Atlantibacter	Enterobacteriaceae	Enterobacterales	Gammaproteobacteria	Proteobacteria	Bacteria				PRJNA33175		565		./rcn/refseq-NR-565-PRJNA33175-.-.-.-Escherichia_hermannii.fna