Mercurial > repos > nml > sistr_cmd

view test-data/sistr-results-13-1101.tabular @ 5:24a7a95867b0 draft default tip

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"planemo upload commit 683b11f79a83cf9e1563e46a75919157fa1136d4"
author nml
date Fri, 19 Mar 2021 20:09:37 +0000
parents 17fcac7ddf54
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cgmlst_ST	cgmlst_distance	cgmlst_found_loci	cgmlst_genome_match	cgmlst_matching_alleles	cgmlst_subspecies	fasta_filepath	genome	h1	h2	mash_distance	mash_genome	mash_match	mash_serovar	mash_subspecies	o_antigen	qc_messages	qc_status	serogroup	serovar	serovar_antigen	serovar_cgmlst
3782467861	0.045454545454545414	330	SRR2174054	315	enterica	/galaxy/database/files/000/dataset_700.dat	13-1101-Paratyphi_B	b	1,2	0.00178577	72308	929	Paratyphi B var. Java	enterica	1,4,[5],12	INFO: Number of cgMLST330 loci found (n=330)	PASS	B	Paratyphi B var. Java	Paratyphi B|Paratyphi B var. Java|Limete	Paratyphi B var. Java