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comparison smalt_map.xml @ 2:5ba47ab90254 draft default tip

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"planemo upload for repository https://sourceforge.net/projects/smalt/ commit e795229a49483da24e80fab0809216557de09840"
author nml
date Thu, 25 Jun 2020 16:45:36 -0400
parents fae9ec82e10f
children
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1:fae9ec82e10f 2:5ba47ab90254
1 <tool id="smalt" name="smalt" version="@VERSION@+galaxy0"> 1 <tool id="smalt" name="smalt" version="@VERSION@+galaxy1">
2 <description>Map query reads (FASTA/FASTQ) format onto the reference sequences</description> 2 <description>Map query reads (FASTA/FASTQ) format onto the reference sequences</description>
3 <macros> 3 <macros>
4 <token name="@VERSION@">0.7.6</token> 4 <token name="@VERSION@">0.7.6</token>
5 <token name="@INPUT_TYPES@">fastq,fastq.gz,fastqsanger,fastqsanger.gz</token> 5 <token name="@INPUT_TYPES@">fastq,fastq.gz,fastqsanger,fastqsanger.gz</token>
6 </macros> 6 </macros>
7 <requirements> 7 <requirements>
8 <requirement type="package" version="@VERSION@">smalt</requirement> 8 <requirement type="package" version="@VERSION@">smalt</requirement>
9 <requirement type="package" version="1.5">samtools</requirement> 9 <requirement type="package" version="1.10">samtools</requirement>
10 </requirements> 10 </requirements>
11 <stdio> 11 <stdio>
12 <exit_code range="1:" level="fatal" description="Unknown error" /> 12 <exit_code range="1:" level="fatal" description="Unknown error" />
13 <regex match="Command line error" 13 <regex match="Command line error"
14 source="stdout" 14 source="stdout"