# HG changeset patch
# User iuc
# Date 1632131741 0
# Node ID b7829778729fe66b39fb6752f25ef06412a8c85b
# Parent  1796ea206dec3442acc217a3f468f47e592fc94a
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/spades commit 4125a5c59656970247dea551c424171bb7623749"

diff -r 1796ea206dec -r b7829778729f spades.xml
--- a/spades.xml	Thu Sep 16 15:26:12 2021 +0000
+++ b/spades.xml	Mon Sep 20 09:55:41 2021 +0000
@@ -28,7 +28,7 @@
         GALAXY_MEMORY_GB=\$(( GALAXY_MEMORY_MB / 1024 ));
     fi &&
 
-    spades.py -o . --disable-gzip-output $sc $onlyassembler $careful -t \${GALAXY_SLOTS:-16} -m \${GALAXY_MEMORY_GB:-250}
+    spades.py -o . --tmp-dir "\${TMPDIR:-.}" --disable-gzip-output $sc $onlyassembler $careful -t \${GALAXY_SLOTS:-16} -m \${GALAXY_MEMORY_GB:-250}
     #if not $kmer_choice.auto_kmer_choice:
         -k "$kmer_choice.kmers"
     #end if