# HG changeset patch
# User nml
# Date 1464723810 14400
# Node ID e37014a072e9f83faf74ec07291f274642b7ffd8
# Parent  80f079961dc9db9a25b2629b2bc6b2119b5668a1
planemo upload commit 733f396b6a4397c3b133bcb6fb3c10f5970db230-dirty

diff -r 80f079961dc9 -r e37014a072e9 CHANGE
--- a/CHANGE	Mon Jan 18 10:02:57 2016 -0500
+++ b/CHANGE	Tue May 31 15:43:30 2016 -0400
@@ -1,3 +1,8 @@
+1.3
+===
+ - Supports SPades 3.8
+ - CHANGE: Improved running time and RAM consumption.
+
 1.2
 ===
  - Supports SPades 3.6.2
diff -r 80f079961dc9 -r e37014a072e9 spades.xml
--- a/spades.xml	Mon Jan 18 10:02:57 2016 -0500
+++ b/spades.xml	Tue May 31 15:43:30 2016 -0400
@@ -1,7 +1,7 @@
-<tool id="spades" name="spades" version="1.2">
+<tool id="spades" name="spades" version="1.3.1">
   <description>SPAdes genome assembler for regular and single-cell projects</description>
   <requirements>
-    <requirement type="package" version="3.6.2">spades</requirement>
+    <requirement type="package" version="3.8.0">spades</requirement>
   </requirements>
   <command interpreter="perl">spades.pl 
     $out_contigs 
@@ -222,7 +222,7 @@
 
 SPAdes – St. Petersburg genome assembler – is intended for both standard isolates and single-cell MDA bacteria assemblies. See http://bioinf.spbau.ru/en/spades for more details on SPAdes.
 
-This wrapper runs SPAdes 3.6.2, collects the output, and throws away all the temporary files. It also produces a tab file with contig names, length and coverage. 
+This wrapper runs SPAdes 3.8, collects the output, and throws away all the temporary files. It also produces a tab file with contig names, length and coverage. 
 
 **License**
 
diff -r 80f079961dc9 -r e37014a072e9 tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Jan 18 10:02:57 2016 -0500
+++ b/tool_dependencies.xml	Tue May 31 15:43:30 2016 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="spades" version="3.6.2">
-        <repository changeset_revision="af7dfb1c3f42" name="package_spades_3_6_2" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <package name="spades" version="3.8.0">
+        <repository changeset_revision="c9eab59c0bc2" name="package_spades_3_8_0" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>