Mercurial > repos > okorol > itsx

annotate ITSx_db/HMMs/I.hmm @ 5:c711ca9a7f4c draft

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author okorol
date Fri, 05 Jun 2015 11:10:49 -0400
parents f82c70f54bd7
children
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1 HMMER3/b [3.0 | March 2010]
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2 NAME 3_End_Phaeophyceae_58S_end_one_long
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3 LENG 45
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4 ALPH DNA
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5 RF no
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6 CS no
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7 MAP yes
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8 DATE Fri Jan 20 12:12:36 2012
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9 NSEQ 157
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10 EFFN 3.732391
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11 CKSUM 82106143
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12 STATS LOCAL MSV -6.9907 0.71931
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13 STATS LOCAL VITERBI -7.6013 0.71931
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14 STATS LOCAL FORWARD -3.9860 0.71931
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15 HMM A C G T
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16 m->m m->i m->d i->m i->i d->m d->d
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17 COMPO 1.91751 1.41520 1.11917 1.26019
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19 0.03429 4.08301 4.08301 1.46634 0.26236 0.00000 *
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155 //
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156 HMMER3/b [3.0 | March 2010]
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157 NAME 3_End_Phaeophyceae_58S_end_two_long
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158 LENG 45
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159 ALPH DNA
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160 RF no
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161 CS no
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162 MAP yes
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163 DATE Sun Oct 9 00:13:57 2011
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okorol
parents:
diff changeset
164 NSEQ 4
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
165 EFFN 3.082031
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
166 CKSUM 3550826365
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
167 STATS LOCAL MSV -8.1048 0.71931
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
168 STATS LOCAL VITERBI -7.8658 0.71931
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
169 STATS LOCAL FORWARD -3.8411 0.71931
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
170 HMM A C G T
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
171 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
172 COMPO 1.71271 1.47634 0.90619 1.67615
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
173 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
174 0.03860 3.96690 3.96690 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
175 1 3.34045 0.14183 3.39374 2.76103 1 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
176 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
177 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
178 2 2.89070 3.50572 0.12655 3.40205 2 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
179 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
180 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
181 3 3.34045 0.14183 3.39374 2.76103 3 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
182 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
183 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
184 4 3.00834 2.54393 3.05952 0.19218 4 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
185 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
186 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
187 5 3.34045 0.14183 3.39374 2.76103 5 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
188 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
189 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
190 6 3.34045 0.14183 3.39374 2.76103 6 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
191 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
192 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
193 7 3.34045 0.14183 3.39374 2.76103 7 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
194 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
195 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
196 8 2.89070 3.50572 0.12655 3.40205 8 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
197 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
198 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
199 9 2.89070 3.50572 0.12655 3.40205 9 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
200 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
201 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
202 10 2.89070 3.50572 0.12655 3.40205 10 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
203 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
204 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
205 11 0.15297 3.30004 2.74948 3.19422 11 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
206 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
207 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
208 12 3.00834 2.54393 3.05952 0.19218 12 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
209 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
210 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
211 13 0.15297 3.30004 2.74948 3.19422 13 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
212 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
213 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
214 14 3.00834 2.54393 3.05952 0.19218 14 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
215 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
216 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
217 15 2.89070 3.50572 0.12655 3.40205 15 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
218 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
219 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
220 16 3.34045 0.14183 3.39374 2.76103 16 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
221 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
222 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
223 17 3.34045 0.14183 3.39374 2.76103 17 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
224 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
225 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
226 18 3.00834 2.54393 3.05952 0.19218 18 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
227 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
228 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
229 19 2.89070 3.50572 0.12655 3.40205 19 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
230 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
231 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
232 20 2.89070 3.50572 0.12655 3.40205 20 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
233 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
234 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
235 21 2.89070 3.50572 0.12655 3.40205 21 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
236 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
237 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
238 22 0.15297 3.30004 2.74948 3.19422 22 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
239 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
240 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
241 23 2.89070 3.50572 0.12655 3.40205 23 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
242 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
243 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
244 24 3.34045 0.14183 3.39374 2.76103 24 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
245 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
246 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
247 25 0.15297 3.30004 2.74948 3.19422 25 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
248 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
249 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
250 26 3.00834 2.54393 3.05952 0.19218 26 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
251 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
252 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
253 27 2.89070 3.50572 0.12655 3.40205 27 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
254 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
255 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
256 28 3.34045 0.14183 3.39374 2.76103 28 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
257 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
258 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
259 29 3.00834 2.54393 3.05952 0.19218 29 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
260 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
261 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
262 30 3.00834 2.54393 3.05952 0.19218 30 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
263 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
264 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
265 31 2.89070 3.50572 0.12655 3.40205 31 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
266 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
267 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
268 32 3.00834 2.54393 3.05952 0.19218 32 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
269 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
270 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
271 33 3.34045 0.14183 3.39374 2.76103 33 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
272 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
273 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
274 34 2.89070 3.50572 0.12655 3.40205 34 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
275 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
276 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
277 35 2.89070 3.50572 0.12655 3.40205 35 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
278 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
279 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
280 36 2.89070 3.50572 0.12655 3.40205 36 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
281 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
282 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
283 37 2.89070 3.50572 0.12655 3.40205 37 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
284 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
285 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
286 38 0.15297 3.30004 2.74948 3.19422 38 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
287 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
288 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
289 39 2.89070 3.50572 0.12655 3.40205 39 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
290 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
291 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
292 40 2.89070 3.50572 0.12655 3.40205 40 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
293 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
294 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
295 41 0.15297 3.30004 2.74948 3.19422 41 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
296 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
297 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
298 42 2.89070 3.50572 0.12655 3.40205 42 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
299 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
300 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
301 43 2.89070 3.50572 0.12655 3.40205 43 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
302 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
303 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
304 44 0.15297 3.30004 2.74948 3.19422 44 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
305 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
306 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
307 45 2.89070 3.50572 0.12655 3.40205 45 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
308 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
309 0.01949 3.94778 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
310 //
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
311 HMMER3/b [3.0 | March 2010]
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
312 NAME 2_5.8_Phaeophyceae_58S_start_long
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
313 LENG 45
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
314 ALPH DNA
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
315 RF no
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
316 CS no
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
317 MAP yes
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
318 DATE Sun Oct 9 00:07:52 2011
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
319 NSEQ 172
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
320 EFFN 3.414490
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
321 CKSUM 3324807830
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
322 STATS LOCAL MSV -7.5493 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
323 STATS LOCAL VITERBI -7.7980 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
324 STATS LOCAL FORWARD -4.1200 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
325 HMM A C G T
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
326 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
327 COMPO 1.23334 1.32585 1.45069 1.56687
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
328 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
329 0.03627 4.02794 4.02794 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
330 1 0.13813 3.40921 2.82069 3.31363 1 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
331 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
332 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
333 2 0.13813 3.40921 2.82069 3.31363 2 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
334 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
335 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
336 3 0.13813 3.40921 2.82069 3.31363 3 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
337 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
338 0.03957 4.02794 3.86405 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
339 4 3.46006 0.12704 3.50837 2.84857 4 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
340 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
341 0.03639 4.02476 4.02476 1.46634 0.26236 0.99239 0.46313
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
342 5 3.11793 2.61377 3.16496 0.17402 5 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
343 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
344 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
345 6 3.11793 2.61377 3.16496 0.17402 6 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
346 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
347 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
348 7 3.11793 2.61377 3.16496 0.17402 7 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
349 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
350 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
351 8 3.46644 0.12630 3.51447 2.85320 8 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
352 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
353 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
354 9 0.13813 3.40921 2.82069 3.31363 9 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
355 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
356 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
357 10 2.96761 3.61705 0.11400 3.52478 10 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
358 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
359 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
360 11 3.46644 0.12630 3.51447 2.85320 11 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
361 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
362 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
363 12 2.96761 3.61705 0.11400 3.52478 12 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
364 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
365 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
366 13 0.13813 3.40921 2.82069 3.31363 13 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
367 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
368 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
369 14 3.46644 0.12630 3.51447 2.85320 14 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
370 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
371 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
372 15 2.96761 3.61705 0.11400 3.52478 15 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
373 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
374 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
375 16 2.96761 3.61705 0.11400 3.52478 16 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
376 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
377 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
378 17 0.13813 3.40921 2.82069 3.31363 17 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
379 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
380 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
381 18 3.11793 2.61377 3.16496 0.17402 18 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
382 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
383 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
384 19 2.75768 3.33183 0.16194 2.98898 19 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
385 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
386 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
387 20 3.11793 2.61377 3.16496 0.17402 20 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
388 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
389 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
390 21 3.40356 0.13949 3.45347 2.72863 21 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
391 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
392 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
393 22 3.11793 2.61377 3.16496 0.17402 22 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
394 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
395 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
396 23 3.11793 2.61377 3.16496 0.17402 23 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
397 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
398 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
399 24 2.96761 3.61705 0.11400 3.52478 24 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
400 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
401 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
402 25 2.96761 3.61705 0.11400 3.52478 25 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
403 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
404 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
405 26 3.46644 0.12630 3.51447 2.85320 26 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
406 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
407 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
408 27 3.11793 2.61377 3.16496 0.17402 27 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
409 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
410 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
411 28 3.40356 0.13949 3.45347 2.72863 28 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
412 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
413 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
414 29 3.46644 0.12630 3.51447 2.85320 29 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
415 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
416 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
417 30 3.24911 0.16062 3.09989 2.74076 30 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
418 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
419 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
420 31 0.19055 2.85099 2.70211 3.02323 31 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
421 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
422 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
423 32 3.46644 0.12630 3.51447 2.85320 32 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
424 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
425 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
426 33 0.38905 2.58578 2.40246 1.85488 33 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
427 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
428 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
429 34 0.13813 3.40921 2.82069 3.31363 34 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
430 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
431 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
432 35 3.46644 0.12630 3.51447 2.85320 35 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
433 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
434 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
435 36 2.96761 3.61705 0.11400 3.52478 36 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
436 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
437 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
438 37 0.16251 3.10809 2.76286 3.16548 37 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
439 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
440 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
441 38 3.11793 2.61377 3.16496 0.17402 38 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
442 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
443 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
444 39 2.96761 3.61705 0.11400 3.52478 39 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
445 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
446 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
447 40 0.13813 3.40921 2.82069 3.31363 40 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
448 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
449 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
450 41 0.13813 3.40921 2.82069 3.31363 41 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
451 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
452 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
453 42 2.84865 3.56389 0.12488 3.46916 42 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
454 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
455 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
456 43 0.17679 2.96825 2.73119 3.08982 43 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
457 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
458 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
459 44 0.13813 3.40921 2.82069 3.31363 44 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
460 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
461 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
462 45 3.46644 0.12630 3.51447 2.85320 45 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
463 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
464 0.01830 4.00996 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
465 //
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
466 HMMER3/b [3.0 | March 2010]
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
467 NAME 4_LSU_Phaeophyceae_4_LSU_start_long
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
468 LENG 45
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
469 ALPH DNA
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
470 RF no
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
471 CS no
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
472 MAP yes
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
473 DATE Fri Jan 20 12:15:29 2012
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
474 NSEQ 48
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
475 EFFN 3.231445
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
476 CKSUM 2699152105
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
477 STATS LOCAL MSV -8.2524 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
478 STATS LOCAL VITERBI -7.5362 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
479 STATS LOCAL FORWARD -3.9900 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
480 HMM A C G T
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
481 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
482 COMPO 1.22159 1.33002 1.44966 1.57931
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
483 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
484 0.03752 3.99479 3.99479 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
485 1 3.05877 2.57614 3.10806 0.18356 1 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
486 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
487 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
488 2 3.05877 2.57614 3.10806 0.18356 2 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
489 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
490 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
491 3 3.39890 0.13436 3.44980 2.80403 3 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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okorol
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okorol
parents:
diff changeset
494 4 2.92673 3.55757 0.12052 3.45913 4 - -
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okorol
parents:
diff changeset
495 1.38629 1.38629 1.38629 1.38629
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okorol
parents:
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496 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
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okorol
parents:
diff changeset
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okorol
parents:
diff changeset
498 1.38629 1.38629 1.38629 1.38629
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okorol
parents:
diff changeset
499 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
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okorol
parents:
diff changeset
500 6 0.16986 3.26223 2.58526 3.15740 6 - -
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okorol
parents:
diff changeset
501 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
502 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
503 7 3.39890 0.13436 3.44980 2.80403 7 - -
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okorol
parents:
diff changeset
504 1.38629 1.38629 1.38629 1.38629
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okorol
parents:
diff changeset
505 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
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okorol
parents:
diff changeset
506 8 3.39890 0.13436 3.44980 2.80403 8 - -
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okorol
parents:
diff changeset
507 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
508 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
509 9 3.05877 2.57614 3.10806 0.18356 9 - -
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okorol
parents:
diff changeset
510 1.38629 1.38629 1.38629 1.38629
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okorol
parents:
diff changeset
511 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
512 10 3.39890 0.13436 3.44980 2.80403 10 - -
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okorol
parents:
diff changeset
513 1.38629 1.38629 1.38629 1.38629
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okorol
parents:
diff changeset
514 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
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okorol
parents:
diff changeset
515 11 3.39890 0.13436 3.44980 2.80403 11 - -
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okorol
parents:
diff changeset
516 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
517 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
518 12 2.92673 3.55757 0.12052 3.45913 12 - -
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okorol
parents:
diff changeset
519 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
520 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
521 13 0.14587 3.35060 2.78262 3.24948 13 - -
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okorol
parents:
diff changeset
522 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
523 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
524 14 3.05877 2.57614 3.10806 0.18356 14 - -
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okorol
parents:
diff changeset
525 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
526 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
527 15 3.39890 0.13436 3.44980 2.80403 15 - -
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okorol
parents:
diff changeset
528 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
529 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
530 16 0.14587 3.35060 2.78262 3.24948 16 - -
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okorol
parents:
diff changeset
531 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
532 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
533 17 0.14587 3.35060 2.78262 3.24948 17 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
534 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
535 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
536 18 2.71470 3.45506 0.14251 3.35200 18 - -
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okorol
parents:
diff changeset
537 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
538 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
539 19 3.39890 0.13436 3.44980 2.80403 19 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
540 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
541 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
542 20 0.14587 3.35060 2.78262 3.24948 20 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
543 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
544 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
545 21 0.14587 3.35060 2.78262 3.24948 21 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
546 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
547 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
548 22 2.92673 3.55757 0.12052 3.45913 22 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
549 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
550 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
551 23 0.14587 3.35060 2.78262 3.24948 23 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
552 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
553 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
554 24 2.92673 3.55757 0.12052 3.45913 24 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
555 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
556 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
557 25 2.92673 3.55757 0.12052 3.45913 25 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
558 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
559 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
560 26 0.14587 3.35060 2.78262 3.24948 26 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
561 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
562 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
563 27 3.39890 0.13436 3.44980 2.80403 27 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
564 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
565 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
566 28 3.39890 0.13436 3.44980 2.80403 28 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
567 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
568 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
569 29 3.39890 0.13436 3.44980 2.80403 29 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
570 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
571 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
572 30 2.92673 3.55757 0.12052 3.45913 30 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
573 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
574 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
575 31 3.39890 0.13436 3.44980 2.80403 31 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
576 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
577 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
578 32 3.05877 2.57614 3.10806 0.18356 32 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
579 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
580 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
581 33 2.92673 3.55757 0.12052 3.45913 33 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
582 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
583 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
584 34 0.14587 3.35060 2.78262 3.24948 34 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
585 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
586 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
587 35 0.14587 3.35060 2.78262 3.24948 35 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
588 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
589 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
590 36 3.05877 2.57614 3.10806 0.18356 36 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
591 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
592 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
593 37 3.05877 2.57614 3.10806 0.18356 37 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
594 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
595 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
596 38 3.05877 2.57614 3.10806 0.18356 38 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
597 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
598 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
599 39 0.14587 3.35060 2.78262 3.24948 39 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
600 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
601 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
602 40 0.14587 3.35060 2.78262 3.24948 40 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
603 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
604 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
605 41 2.92673 3.55757 0.12052 3.45913 41 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
606 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
607 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
608 42 3.39890 0.13436 3.44980 2.80403 42 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
609 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
610 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
611 43 0.14587 3.35060 2.78262 3.24948 43 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
612 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
613 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
614 44 3.05877 2.57614 3.10806 0.18356 44 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
615 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
616 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
617 45 0.14587 3.35060 2.78262 3.24948 45 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
618 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
619 0.01893 3.97621 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
620 //
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
621 HMMER3/b [3.0 | March 2010]
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
622 NAME 1_SSU_Phaeophyceae_1_SSU_end_long
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
623 LENG 45
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
624 ALPH DNA
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
625 RF no
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
626 CS no
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
627 MAP yes
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
628 DATE Fri Jan 20 12:07:06 2012
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
629 NSEQ 89
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
630 EFFN 3.229401
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
631 CKSUM 1632466499
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
632 STATS LOCAL MSV -8.0048 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
633 STATS LOCAL VITERBI -7.6816 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
634 STATS LOCAL FORWARD -4.1101 0.71932
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
635 HMM A C G T
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
636 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
637 COMPO 1.27187 1.62651 1.24657 1.44566
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
638 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
639 0.03753 3.99441 3.99441 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
640 1 0.14597 3.34993 2.78218 3.24874 1 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
641 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
642 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
643 2 2.92625 3.55688 0.12059 3.45837 2 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
644 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
645 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
646 3 3.05809 2.57571 3.10741 0.18367 3 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
647 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
648 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
649 4 3.39812 0.13446 3.44905 2.80346 4 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
650 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
651 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
652 5 2.92625 3.55688 0.12059 3.45837 5 - -
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
653 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
654 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
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okorol
parents:
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okorol
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okorol
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okorol
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okorol
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okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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okorol
parents:
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okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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f82c70f54bd7 Uploaded
okorol
parents:
diff changeset
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okorol
parents:
diff changeset
775 //