# HG changeset patch # User padge # Date 1661947990 0 # Node ID 4a5c94d1d8bb9a146bb9fa8815e60b582dcd8719 # Parent cc0957c46408f0af1f06f6ad73b192001188202a planemo upload for repository https://github.com/kirstvh/MultiplexCrisprDOE commit a920127294bcfcb708881e28144a77a5c10d46d2 diff -r cc0957c46408 -r 4a5c94d1d8bb main.jl --- a/main.jl Thu May 12 17:39:18 2022 +0000 +++ b/main.jl Wed Aug 31 12:13:10 2022 +0000 @@ -267,7 +267,7 @@ filename = command_args["f"] sheet = 1 - data = DataFrame(XLSX.readtable(filename, sheet)...) + data = DataFrame(XLSX.readtable(filename, sheet)) p_gRNA_reads = data[!,"gRNA_read"] p_gRNA_reads_normalized = p_gRNA_reads/sum(p_gRNA_reads) # normalize f = p_gRNA_reads_normalized @@ -275,7 +275,7 @@ filename = command_args["e"] sheet = 1 - data = DataFrame(XLSX.readtable(filename, sheet)...) + data = DataFrame(XLSX.readtable(filename, sheet)) p_gRNA_edit = data[!,"gRNA_edit_efficiency"] e = p_gRNA_edit grna_dict["p_gRNA_edit"] = e