Mercurial > repos > pcingola > snpeff
diff snpEff_2_1a/snpEff_2_1a/scripts/snpEffXL.sh @ 3:c052639fa666 default tip
Uploaded
author | pcingola |
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date | Fri, 20 Apr 2012 11:22:59 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/snpEff_2_1a/snpEff_2_1a/scripts/snpEffXL.sh Fri Apr 20 11:22:59 2012 -0400 @@ -0,0 +1,9 @@ +#!/bin/sh + +DIR=$HOME/snpEff/ +LIB=$HOME/snpEff/lib + +java -Xmx20G \ + -classpath "$LIB/charts4j-1.2.jar:$LIB/flanagan.jar:$LIB/freemarker.jar:$LIB/junit.jar:$LIB/trove-3.0.2.jar:$LIB/akka-actor-2.0-M4.jar:$LIB/scala-library.jar:$DIR" \ + ca.mcgill.mcb.pcingola.snpEffect.commandLine.SnpEff \ + $*