--- a/tools/align_back_trans/align_back_trans.xml	Thu May 11 06:13:04 2017 -0400
+++ b/tools/align_back_trans/align_back_trans.xml	Mon Aug 21 06:26:14 2017 -0400
@@ -1,16 +1,16 @@
-<tool id="align_back_trans" name="Thread nucleotides onto a protein alignment (back-translation)" version="0.0.9">
+<tool id="align_back_trans" name="Thread nucleotides onto a protein alignment (back-translation)" version="0.0.10">
     <description>Gives a codon aware alignment</description>
     <requirements>
         <requirement type="package" version="1.67">biopython</requirement>
     </requirements>
     <version_command>
 python $__tool_directory__/align_back_trans.py --version
-</version_command>
+    </version_command>
     <command detect_errors="aggressive">
 python $__tool_directory__/align_back_trans.py $prot_align.ext '$prot_align' '$nuc_file' '$out_nuc_align' '$table'
     </command>
     <inputs>
-        <param name="prot_align" type="data" format="fasta,muscle,clustal" label="Aligned protein file" help="Mutliple sequence file in FASTA, ClustalW or PHYLIP format." />
+        <param name="prot_align" type="data" format="fasta,clustal" label="Aligned protein file" help="Mutliple sequence file in FASTA, ClustalW or PHYLIP format." />
         <param name="table" type="select" label="Genetic code" help="Tables from the NCBI, these determine the start and stop codons">
             <option value="1">1. Standard</option>
             <option value="2">2. Vertebrate Mitochondrial</option>