Mercurial > repos > peterjc > blastxml_to_top_descr

changeset 12:fe1ed74793c9 draft

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Uploaded v0.1.1, embed citation in tool XML
author peterjc
date Wed, 30 Jul 2014 05:36:52 -0400
parents 98f8431dab44
children 8dc4ba7eba5d
files tools/blastxml_to_top_descr/README.rst tools/blastxml_to_top_descr/blastxml_to_top_descr.xml tools/blastxml_to_top_descr/repository_dependencies.xml
diffstat 3 files changed, 6 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/tools/blastxml_to_top_descr/README.rst	Fri Jun 13 07:07:35 2014 -0400
+++ b/tools/blastxml_to_top_descr/README.rst	Wed Jul 30 05:36:52 2014 -0400
@@ -69,6 +69,7 @@
 v0.1.0  - Switch to using an optparse based API for Python script internally.
         - Support BLAST XML with multiple ``<Iteration>`` blocks per query.
         - Support the default 25 column extended tabular BLAST output.
+v0.1.1  - Embed citation information in the tool XML (new Galaxy feature).
 ======= ======================================================================
 
 
--- a/tools/blastxml_to_top_descr/blastxml_to_top_descr.xml	Fri Jun 13 07:07:35 2014 -0400
+++ b/tools/blastxml_to_top_descr/blastxml_to_top_descr.xml	Wed Jul 30 05:36:52 2014 -0400
@@ -1,4 +1,4 @@
-<tool id="blastxml_to_top_descr" name="BLAST top hit descriptions" version="0.1.0">
+<tool id="blastxml_to_top_descr" name="BLAST top hit descriptions" version="0.1.1">
     <description>Make a table from BLAST output</description>
     <version_command interpreter="python">blastxml_to_top_descr.py --version</version_command>
     <command interpreter="python">
@@ -108,4 +108,7 @@
 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr
 
     </help>
+    <citations>
+        <citation type="doi">10.7717/peerj.167</citation>
+    </citations>
 </tool>
--- a/tools/blastxml_to_top_descr/repository_dependencies.xml	Fri Jun 13 07:07:35 2014 -0400
+++ b/tools/blastxml_to_top_descr/repository_dependencies.xml	Wed Jul 30 05:36:52 2014 -0400
@@ -1,4 +1,4 @@
 <?xml version="1.0"?>
 <repositories description="Requires BLAST XML and database datatype definitions.">
-<repository changeset_revision="de11e1a921c4" name="blast_datatypes" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
+<repository changeset_revision="de11e1a921c4" name="blast_datatypes" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
 </repositories>