Mercurial > repos > peterjc > clc_assembly_cell

diff tools/clc_assembly_cell/README.rst @ 3:9fe1a922353b draft

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v0.0.5 option to discard unmapped read; env var bugfix
author peterjc
date Wed, 11 May 2016 06:49:58 -0400
parents 139b6f0a0bb5
children 46a667b5e19e
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--- a/tools/clc_assembly_cell/README.rst	Tue Sep 01 06:55:13 2015 -0400
+++ b/tools/clc_assembly_cell/README.rst	Wed May 11 06:49:58 2016 -0400
@@ -89,6 +89,10 @@
         - Added citation tags.
         - Planemo for Tool Shed upload (``.shed.yml``, internal change only).
 v0.0.4  - Bug fix for ``<version_command>`` to capture tool version.
+v0.0.5  - Support the ``-u`` or ``--discardunmapped`` option to discard
+          unmapped reads in the CLC Mapper wrapper.
+        - Bug fix to use the ``$CLC_ASSEMBLY_CELL`` environment variable when
+          calling ``clc_cas_to_sam`` in the CLC MApper wrapper.
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