Mercurial > repos > peterjc > count_roi_variants

comparison tools/count_roi_variants/count_roi_variants.xml @ 2:167765a633c0 draft default tip

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"Update all the pico_galaxy tools on main Tool Shed"
author peterjc
date Fri, 16 Apr 2021 22:34:00 +0000
parents 3ee6f4d0ac80
children
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1:3ee6f4d0ac80 2:167765a633c0
1 <tool id="count_roi_variants" name="Count sequence variants in region of interest" version="0.0.5"> 1 <tool id="count_roi_variants" name="Count sequence variants in region of interest" version="0.0.6">
2 <description>using samtools view</description> 2 <description>using samtools view</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.2">samtools</requirement> 4 <requirement type="package" version="1.2">samtools</requirement>
5 </requirements> 5 </requirements>
6 <version_command> 6 <version_command>
94 If you use this Galaxy tool in work leading to a scientific publication please 94 If you use this Galaxy tool in work leading to a scientific publication please
95 cite: 95 cite:
96 96
97 Heng Li et al (2009). The Sequence Alignment/Map format and SAMtools. 97 Heng Li et al (2009). The Sequence Alignment/Map format and SAMtools.
98 Bioinformatics 25(16), 2078-9. 98 Bioinformatics 25(16), 2078-9.
99 http://dx.doi.org/10.1093/bioinformatics/btp352 99 https://doi.org/10.1093/bioinformatics/btp352
100 100
101 Peter J.A. Cock (2016), Count sequence variants in region of interest in BAM file. 101 Peter J.A. Cock (2016), Count sequence variants in region of interest in BAM file.
102 http://toolshed.g2.bx.psu.edu/view/peterjc/count_roi_variants 102 http://toolshed.g2.bx.psu.edu/view/peterjc/count_roi_variants
103 103
104 This wrapper is available to install into other Galaxy Instances via the Galaxy 104 This wrapper is available to install into other Galaxy Instances via the Galaxy