<?xml version="1.0"?>
<tool_dependency>
    <package name="effectiveT3" version="1.0.1">
        <install version="1.0">
            <actions>
                <!-- Set environment variable so Python script knows where to look -->
                <action type="set_environment">
                    <environment_variable name="EFFECTIVET3" action="set_to">$INSTALL_DIR</environment_variable>
                </action>
                <!-- Main JAR file -->
                <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_GUI-1.0.1.jar</action>
                <!-- If using action type download_file will need to move the file,
                <action type="move_file"><source>TTSS_GUI-1.0.1.jar</source><destination>$INSTALL_DIR/</destination></action>
                -->
                <!-- Three model JAR files -->
                <action type="make_directory">$INSTALL_DIR/module</action>
                <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_ANIMAL-1.0.1.jar</action>
                <action type="move_file"><source>TTSS_ANIMAL-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>        
                <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_PLANT-1.0.1.jar</action>
                <action type="move_file"><source>TTSS_PLANT-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>
                <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_STD-1.0.1.jar</action>
                <action type="move_file"><source>TTSS_STD-1.0.1.jar</source><destination>$INSTALL_DIR/module/</destination></action>
                <action type="shell_command">wget http://effectors.csb.univie.ac.at/sites/eff/files/others/TTSS_STD-2.0.2.jar</action>
                <action type="move_file"><source>TTSS_STD-2.0.2.jar</source><destination>$INSTALL_DIR/module/</destination></action>
            </actions>
        </install>
        <readme>
Downloads effectiveT3 v1.0.1 and associated models from http://effectors.org/ aka http://effectors.csb.univie.ac.at/
        </readme>
    </package>
</tool_dependency>