Mercurial > repos > peterjc > get_orfs_or_cdss
comparison test-data/get_orf_input.t11_nuc_out.fasta @ 1:922d69bd5258 draft
Uploaded v0.0.2, fixes labelling issue on reverse strand.
author | peterjc |
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date | Tue, 29 Jan 2013 10:19:01 -0500 |
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0:9cff9a1176ea | 1:922d69bd5258 |
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1 >alpha|CDS1 length 87 aa, 264 bp, from 68..331 of alpha three forward CDS using table 1 | |
2 ATGNATGNATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAA | |
3 AAAAAAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | |
4 CCCCCCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |
5 GGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTN | |
6 NNNNNNNNNNNNNNNNTAANNTAG | |
7 >alpha|CDS2 length 84 aa, 255 bp, from 72..326 of alpha three forward CDS using table 1 | |
8 ATGNATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |
9 AAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | |
10 CCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |
11 GGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNN | |
12 NNNNNNNNNNNNTAA | |
13 >alpha|CDS3 length 86 aa, 261 bp, from 76..336 of alpha three forward CDS using table 1 | |
14 ATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |
15 AAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | |
16 CCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |
17 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNN | |
18 NNNNNNNNTAANNTAGMNTGA | |
19 >beta|CDS1 length 87 aa, 264 bp, from 69..332 of beta three forward CDS using table 11 | |
20 GTGNATANATTNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAA | |
21 AAAAAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | |
22 CCCCCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |
23 GGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNN | |
24 NNNNNNNNNNNNNNNNTAANNTAG | |
25 >beta|CDS2 length 84 aa, 255 bp, from 73..327 of beta three forward CDS using table 11 | |
26 ATANATTNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |
27 AAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | |
28 CCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |
29 GGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNN | |
30 NNNNNNNNNNNNTAA | |
31 >beta|CDS3 length 86 aa, 261 bp, from 77..337 of beta three forward CDS using table 11 | |
32 ATTNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |
33 AAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC | |
34 CCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT | |
35 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNN | |
36 NNNNNNNNTAANNTAGNNTGA |