Mercurial > repos > peterjc > mira4_assembler

annotate test-data/tvc_mini.fastq @ 1:70248e6e3efc draft

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v0.0.7 move dependency to package_mira_4_0_2 etc
author peterjc
date Wed, 05 Aug 2015 11:31:05 -0400
parents 6a88b42ce6b9
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 @gnlti136477918
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2 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGCGGCCGCCCGGGCAGGTACCCTCCACCATGAAACCAGGCTTGGGTCCCTCAGGCTGCCTCTTGGTGCTGATAATCTTTCCCTGTGCCTTTGCCTCAGCCTTCAACTTATCATTCTTCTTGATCCTCTCCATTATCTCCTCATGGCAACGAGATGGCTGGACATGTTCCACACGAACATGAATCCTCTTCCTTATGATCCTGTTACCAACCTGTTTGTTGACCTCAACACCAACAGCGCGCTTGGTAACATTCCAGACCCGACCCGTGCGCCCATGGTAGAACTTGTGGGGCATACCTTTGTGGATCGACCCGTTAACCTTGACATCAACATAGTCGCCGACTTTGAAGATACGAAGGTAAGTTGTGAGATGGGTAGGACCCTTCTTCCTGAATGCCCGAGCAAATAGATCCCTGGTGCGTGAACTCAAACCGTGACCCGCCGGCATTTTGAGGTGTTTTTCAGCTGCCTTGTTCACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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3 +
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4 38<>><><<96-++42:AABBCCCCCCCCDFFFIYYIIIIIINTTTTNNNNNNTTTTTTNNIIIIHHHHHHYIFFFIDIINIITTTOQDDDHHHNTYTFFFIIINNIITDDDDDDFLLTTTLLLYYYYYYFFIIIILKOOYYYNNNNNNOOKKKKILLLFFIOOTTNLLLLLNYYYYKYFDDDLLLNNNTTNNLMKKSYNNJIIGGGGLLIILOOYYYYYYYYYTNNNNNTYYYYYYYTOLLLLLLNTTYYTTTLLTYYKKKONNNNLLLLGGINIIIIIINNNNNNNNIHHHHHHHHHHINIITTTTNNNNNTYTNNNNIIIFFDHHHFFINNNNIHHHDDEIDDDNNDDKQQQQMMMQQYYNNIDCBBBBAHIGGGKYYYOOD?<AACCCCCHCCC@>>>>HBBAAAA>@999AOOOYIIICC<<,,,99HHHFKK??C>>B>>H?6/+))42856301:7<>HHEI4/))-10449--0..((*4))*35A<9+++44>BB754---@<;42*))45:7024.(')))')++049>>41-'(,'(.2393222/3171((((-.4011/0+).)''),..4133><B=451119411+))<44:686:/066888888=::884))*'''**,''*-.''*,/2(*144+')64>;1/,'')''1*30+0..****(*0-.4-)*),'(''+,-((*+))**+,''''''***''***-*)121,''''(+*,,+-((****.0..,0*))*(),))''))*+,*)()))''''+'')'')**)()'','')'(**((*((*(((*441.-*****())+*''')-++*****-*((((**))))))*)))++***)(**11.()****0*-,((*--.***,((,,,**'')'''')'-((--,''**441***)+'(''*,*(
6a88b42ce6b9 Uploaded v0.0.4, previously only on the TestToolShed
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5 @gnlti136478624
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6 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAGCGTGGTCGCGGCCGAGGTACCCTCTACCATGAAACCAGGCTTGGGTCCCTCTGGCTGTCTCTTGGTGCTGATAATCTTACCTTGTGCCTTGGCCTCAGCCTTCAACTTATCGTTCTTCTTGATCCTCTCCATGATCTCCTCATGGCACCTTGATGGCTGGACATGTTCCACACGAACATGAATCCTCTTCCTTATGATTCTGTTTCCAACCTGCTTGTTGACCTCAACACCAACAGCACGCTTGGTGACGTTCCATACCCGACCCGTGCGGCCATGATAGAACTTGTGGGGCATACCTTTGTGGATCGACCCGTTAACCTTGACATCAACATAGTCGGCGACTTTGAAGATACGAAGGTAAGTTGTGAGATGGGTAGGACCCTTCTTCCTGAATGGCCGAGCAAATAGATCTCTGGGTGCGGGAACTCAAACCGGGAACCGGCGGCATTTTGCGGTGTTTTTAGACCCTGCCGGGGGGGCGGTCGAAAGGCCGATTCTTGAGATTTTCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGGTAGGAGGTTGTAATTGGAAAAACCTGGGGTAGCAAGTTAATGGCTTGAGCAATTCCGTTCGGCGGGTGGGTATAGAGAAGGGGCGGGCGATCGGGATCCGAAGATGGGGAGCGGATGGGGAGGAGAGGCAGGTGGGGATATAGGGGGGGGGTGGGGTAGGGGAGGGGCGGTGCTGTAGGGGGAGGGGCGGCGTTGGTTTTCTGTGTTACGAGTTGGGTGACCCGAAGTAATTGGGG
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
6a88b42ce6b9 Uploaded v0.0.4, previously only on the TestToolShed
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9 @gnlti136478626
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10 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGCGGCCGCCCGGGCAGGTCTGAAAAACACCTCAAAATGCCGGCGGGTCACGGTTTGAGGTCACGCACCAGAGATCTATTTGCTCGGGCATTCAGGAAGAAGGGTCCTACCCATCTCACAACTTACCTTCGTATCTTCAAAGTCGGCGACTATGTTGATGTCAAGGTTAACGGGTCGATCCACAAAGGTATGCCCCACAAGTTCTACCATGGCCGCACGGGTCGGGTATGGAACGTCACCAAGCGCGCTGTTGGTGTTGAGGTCAAGCATGAGGTGGGAAACAGAATCATAAGGAAAAGGATTCATGTGCGTGTGGAAGATGGTCAGGGATCGAGGTGCCATGAGGAGATCATGGTGAGGATCGAGAAGAACGATTAAGGGGAAGGCTGAGGGCGAGGGACAAGGTAAGATTATCAGCGACAAGAGACAAGCGGAGGGAGCCACGGCTGGGTGTGTGGTAGAGGGTGCCTCGGGCCGGGGCAAGGCTAAGCCGAATGCTGGGGATATTCATTAGACTGGGGGGCGGTCGAGGGTGGGTCGTAATGGGCCATTTGCGCGTATGGTGGGGTTGTTTGACATTGCGCTGGCCTCGGTTTACAGGGTTGTGATTGGAAAGCCGTGCGGTTGCCAACGTTAGTGTTTGGGAGACGTTCGCGTTCGGGGGCTGGGGTATTAAGGGGGGTCTGGGGTAAGGGCGTGCGAGGATGGTGGAGGGGTTTGGGGTTGGGCGTCTGTTTCGGGGTTTGTGGCGGGGGGTTGGTGGTTGCGTGACGGTGGGGGGGTTGGGCAGGCTATGGCGGGGCGTGGTGTTGGTCTGGTTGTGAGGATGTGAGTGTGCGTTGTTGTGTATTGGGACAGGT
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12 ))..28:>C>CDDDDDDCCCCDDD>>A990028>HFFFIIFDDDDDHOTYYNGFAAAA;>??BQQIDDDIDIIIIGMMDDDDDDNIIIGGFFFFIMYKKIKKDD>D>>>C>D>><<<>::..'')46>IIIQIYYYMFDDAADKKKKYYYYYYNNDDDDIIGGKK777MMFFFKDDFAADDDDFKKKKFFFKIDDDDDDKIIIIEMFF=@@@B@BB??>O???OOTTTTLLKKK???DDDD>AAAA>B994B122:=B44/--447<155>>IIFFIKKKGGGGIIN944499C>>>>>>9</--7/00?;33/5/''''))**,.,,,2/0/20004449,,,-,6,--2:G>D>D74-++.15;911**+/-''))****-,''))1.2-.*****-<>71+**()+19:46.--+-*1611+*((****'''''(-/411-1***.((+***('**-8211,-**'''')+,,4,))''))))'')),,(')))).5++))'')).1-+,,.-+(''(++,,,('''))*''''))')+).''))*)-('')+)*((++.+++-*))('))''))+-0./,,))''))'')''*'')))''****.+*''*))'')'')'')))**+++))'''))'''*''*((****'''')'(,(''''''')*''))''))++*(((*((-))'')-)**()******042))***((*))''))*,-.((*)'')%%%)+++****((***-+*)''''))))''''))''''''')))),))***+('))))+.,)()+**''+.-)))(')''))'(***,(((,,***((((**++'')'(*))'''(**'''******((****//--))0+)''))*****))'')%%'')('*)))-(*01**))'((
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13 @gnlti136479063
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14 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAGCGTGGTCGCGGCCGAGGTACCCTCTACCATGAAACCAGGCTTGGGTCCCTCTGGCTGTCTCTTGGTGCTGATAATCTTACCTTGTGCCTTGGCCTCAGCCTTCAACTTATCGTTCTTCTTGATCCTCTCCATGATCTCCTCATGGCACCTTGATGGCTGGACATGTTCCACACGAACATGAATCCTCTTCCTTATGATTCTGTTTCCAACCTGCTTGTTGACCTCAACACCAACAGCGCGCTTGGTGACGTTCCATACCCGACCCGTGCGCCCATGGTAGAACTTGTGGGGCATACCTTTGTGGATCGACCCGTTAACCTTGACATCAACATAGTCGGCGACTTTGAAGATACGAAGGTAAGTTGTGAGATGGGTAGGACCCTTCTTCCTGAATGGCCGAGCAAATAGATCCCTGGTGCGTGAGCTCAAAGCGTGGACCGGCGGCATTTTAGGGTGTTTTTCAGCTGGCTCGGTGGTTTGAATGTGACTTGGGCGGGGGGGGGGTCGAAAGGCGAATTTGGAGATTTTCATAAAATTGGGGCGGTTGAAGATTGATTTTAAGGGGCAATTTGGGCTATAGGGGTGGTTTTAAATTAATGGGGGTGGTTTAAAAGTGTGATGGGGAAACGTGGGTTACCAATTTATGGGTGTGTGGAGTTCCCTTTGTGAGGTGGTATAGGAAAGGGGGGGCGTGACCTGCCACGTGGGGGGGGAAGTGTATGGGGGCGGGTTGGGGGGTTGAGGGGGGTGTGGGTGTGGGGGTGGGTTTTGTTAGGCGAGGTGGTTTTTTTTTCTTTTTTTTTTTAGTGGAGGTGT
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16 04--46:<<B<<>@>HHEB<822<<IEHIHCCCCCCIIIITTIIIIIINNTTTTTYTIHHHHHHNNNIIDDDDFFNTKM>>?OQFFFMKOOTFDDDDHHIIIIOHFFFFFINTDDAAAADHHDDDOYNNHHFFDDDDDDFDC=AA=DIIIIFFNHHFFFFNNNNNNNNNNDD448DNTOOKKKOBB?DFGGGNOTOO555>>A>>>AAF:::>>@DB=====5AACOIIBCCBB<5005<41''+18EAAAHHHB>96-+,+14:AAIB??>>CD>>;87>5:30-14477<>@CDDD>>?==MQYI>H---88:77:<B>>=33000008<9::>BBBFHHCCC>IFDDDOOOQIQQII:2((+6<552228>DDDEH>>33399>31)''-.FFIMIIIO>>333;@II>71:37<AAEIAA778<B69,,,01BBIKFF>>>944,,,6:6/(((*44<<43,,,66AEH98,,,6/+**--..((*,1><::65/0*'))'(,-,)++*31+((*((**.,+*'')'()'''*++))''('*+26410''''+)(())''))*'(***++*))*((****(''''')++**)+'')*))*.-***))*)*-/****,-30.)''''''''***''''')-.*))'')''**++*))/,,((,+-***+)'''''')+'''.*)')'(0-+((+++)))'''(*+'''')'(**,***''''))*))'')))),''))''))*((***))/()(*''''++**((((((****(')))))*))'),))'')''.)))))))'')+,++')-))'(+))***))''))****++))))+1-**))**'(140''))**))'')+**(
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17 @gnlti136479357
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18 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGTGGTCGCGGCCGAGGTACCCTGCACCATGAAACCAGGCTTGGGTCCCTCTGGCTGTCTCTTGGTGCTGATAATCTTACCTTGTGCCTTGGCCTCAGCCTTCAACTTATCGTTCTTCTTGATCCTCTCCATGATCTCCTCATGGCACCTTGATGGCTGGACATGTTCCACACGAACATGAATCCTCTTCCTTATGATTCTGTTTCCAACCTGCTTGTTGACCTCAACACCAACAGCGCGCTTGGTGACGTTCCATACCCGACCCGTGCGGCCATGGTAGAACTTGTGGGGCATACCTTTGTGGATCGACCCGTTAACCTTGACATCAACATAGTCGCCGACTTTGAAGATACGAAGGTAAGTTGTGAGATGGGTAGGACCCTTCTTCCTGAATGCCCGAGCAAATAGATCCCTGGTGCGTGGACTCCAAACGTGAACTTGCCGGGCGGGGGGGAGAGGGGGAGCGGGGGGGGGGGAGAATAAGGGGGGAGGGGAGGGGGAGAGAAAAGGGAGGAGGGGGGGGGTAGGGAGGGAGAGGGAGGGGGGAGGGGGGGGGAGGGGGGGGGGGGAGGGAAGGGGGGGGAGGGGGGGAGGGGGAGGGGAGAGGGGGAGGGGAGGGGGGGGGGAGGGGAGGGGAAGAGGGGGGGGGGGGGGGGGGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGGGGGGGGAGGGAGAAGGAGAAA
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20 .4<BB;>>>>>>>>FDCCCCCCIINIIIDCCCCCCDDDDYQKKFNNNCAAAAAINNIIINTIIHHDDDDDDDDDDDKITTTTLYYYYYLFFIIIILOKKKIIIIKKOKYFDDDDDFIIIIIKKKLLLLTIDDDDDFFDDDDDNNIIIIIKKDDDDHHJOYYSSMMFFADDDDLYSSB>666>BDDDDKOOKJJOOJJED==99AOIJJOOYYYLJJJLLTTTTLYYYYYYYYYYLLIIBBADDNOIIIIIINDAADDDDKOOIIIIIFDDA>7==@@DII??887BBOOFDDDDDIYYNNNHDDKOO?BBHHINODDAF>A>AADFFIIOGFFFFIITOOIDDDDDDDDDDDHHD89,,,<>FFFDD>99<<<B<845;<BAAA;>99=EBIIIIIOOD@@><>AB<8::AA:>AABHIHHHCCC99--+46CCCIIIIAA551-4440++)))4499+))019<>>>1/()0/-('''129.,//+((**+++8@@,*)11))*+***+++))%(,.*)))..,.2+**+8..)))),*))'')))''.''+)*++)+)))''))'(++++*))'''''))****))''))/.03:=741.''**),''''**))))))4**)')'').11.('*))'%)*-.2))*.0('''))(')''))****))('+'')''))****,((((**))1..''))***)1-1-.''),,''))%(.**)(')))*)-().-.***))1)''+''))****))''
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21 @gnlti136479522
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22 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGCGGCCGCCCGGGCAGGTCTGAAAAACACCGCAAAATGCCGGCGGGTCACGGTTTGGGGTCGCGCACCAGAGATCTATTTGCTCGGGCATTCAGGAAGAAGGGTCCTACCCATCTCACAACTTACCTTCGTATCTTCAAAGTCGGCGACTATGTTGATGTCAAGGTTAACGGGTCGATCCACAAAGGTATGCCCCACAAGTTCTATCATGGCCGCACGGGTCGGGTATGGAACGTCACCAAGCGTGCTGTTGGGTGTNGAGGTCAAAAGCAAGTTGGAAACAGAATCATAAGGAAGAGGATTCATGTCCGTGTGGAACATGTCCAGCCATCAAGGTGCCATGAGGAGATCATGGAGAGGATCAAGAAGAACGATTAAGTGAAGGCTGAGGGCAAGGCACAAGGTATGATTATCAGGACCAAGAGACAGGCAGAGGGGACCAAGGCCTGGTTTCATGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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24 (/..2>>H@CACCHICCCCCCIIYTTTFA>>>ADIIIIOTNNNNNIKINIIHDDDIIIHOMMFNNHDDDDDFINIIKOKKKFFIIIITYTLYIIIIIINTTTIFFFFFKLLYYYYYNNNNHHDDDGGNYYYYYYFDGDDDTHIIIIIIIKFFFIIITYINIIIITTTTYYYYTTNNNNNNNIIIIIIIIIFFIOOOOOIFFFFIIINOFKKNND84**+::FFFDHDDDDDIDD>44***49IIIFCIA?94233AIIIMQOOBFF:4-***66CCCCD>>444>?B44*((***45C>@BHIAAAA94%!%44=1-''''))''+(+/,((*245411.40)((+4::79..***-+/.()14BEEIIBCFIIHD88,,,NBID>>A>BB?AAAA>H:::;::4-+,,4/;46,**4841))/1.''*)))+444+++520'')11)(*.+,0**0((*159501224594406652//-/-2,/*1*')+.()./1.01::>>>>5511.4***1:5*((,-/-((******+*-'')((/20-)-,-*++.1/.(())''),351''))'(..280.'')+()**,398..''))**((+1.(())''))**-.--,,**''*)((-)***(()),1,/.1,))))+,+*+*++,-,'''')**((+*++,))))''))**1.,,***+****,+**+++4***.*))'')'')))''))*.5811.--+,+*+*))+,,-..+