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view test-data/U13small_m.mira4_de_novo.fasta @ 3:a4f602cc3aa9 draft

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v0.0.9, was missing mirabait. Adds tests for miraconvert
author peterjc
date Fri, 02 Oct 2015 06:12:23 -0400
parents 6a88b42ce6b9
children
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>MIRA_rep_c1
aaatttcataaaatttctcatttcaaaaacgagaaaattaaggccttgcggggttaaatc
gttatcaagtaatcagtcggctcactgcccagtgtggacactggccaatattatggcacc
agcctttgagaaaaggaaacctttttttgaatccatctccctgacctggggtttgggttg
ggttttatcagcatagggtgacaggcaagttcaatctgattggatcctggatcccatcat
ggggtatctgttcctaaatcattccctgatcctcggtcagagcgagcgcttaggttcccg
ctgcagttaaacacctggttcatctgggcatactaaggttatgactttccacctgggagt
ccacgacaactgaaaaaactcaaaacttctttaagtagaagttgagcctgaagctgaggc
agctgtttcagagaggaggaggaggaggagatagcaaatgtcaagggatttccatttctc
tttcaatgccaacatacttcagggcatcagcctggctgtatctgtaatcaaaaaacagtt
cttcgcaagtctggatggctctcctgacaaaaacacctatcctgtgatcaccattaacca
tcataacttttgcatagcagtttggatttaccgaatgatttgcaaaacgaattttgttac
ccttgcaggttgcatccaccacaaaatcattgttcaagttgaacagaaagctgcacatgt
atttatcacacactttccctcttccgtcagcttagcttcaggaacctcgagtactgtggg
caatttagaaaaagaaaatgccgtttgaaattctgaatttgcaaagtactataagaataa
tttatagcaatgagtttaaaactcaactttttattgccttctcaccagctgcaaagtgtt
ttgtaccagtgaatttttgcaataatgcagtatggtatatttttcaactttgaataaaga
atacttgaaattgaaaaaaaaaattgagtctgatgggtctagtgtgtttataaaatgact
taagatcccacagttattttaaagtaatacattactcaactggtattcattttgatgcca
ttattttattttataaaactagtcatccttgcagaagtgtatctgattaactcttgacaa
ctactttgcctattttattaacagctgcatttaacccacgtgacaggataactaatttct
attgtttttgtatttttgcctcctccttccaagatagcagtagagtactgtgttaaatct
tgcttcagaagagcttgtttaaaatagttataaagaaagtaaaatacatagaaaaacacg
ttataattttaaattaaaaaagaaaaaagatgtctactctgaataaattatgcatacata
taaggtctgaacaaaaacatgaaaagatgggctctgagtatcaattttaaaaatctttac
cagtataacattactcaaacaaaaattaaaatttaatataattaagtacatattccaaga
caacaaatggaccttgactgttaattctgg
>MIRA_rep_c2
gcaatatcgtgacgatatgtawgataaatacatgtgcagctytctgttcaacttgaacaa
tgattttgtggtggatgcaacccgcaagggtaacaaaattcgttttgcaaatcattcggt
aaatccaaactgctatgcaaaagttatgatggttaacggtgatcacaggatakgtatttt
tgccaagagagccatccagactggcgaaragctgttttttgattacagatacagccaggc
tgatgccctgaagtatgtcggcatcgaaagagaaatggaaatcccttgacatctgctacc
tcctccccctcctctgaaacagctgccttagcttcaggaacctcgagtactgtgggcaat
ttaaaaaaagaacatgcagtttgaaattctgaatttgcaaagtactgtaagaataattta
tagtaatgagtttaaaaatcaactttttattgccttctcaccagctgcaaagtgttttgt
wccagtgaattttgcaataatgcagtatggtacattttcactttgaataaagaatacttg
a
>MIRA_rep_c3
gcgttattaaagacttttttttwtttttttttcaagttcaagtattctttattcaaagtt
gaaaaatgtaccatactgcattattgcaaaaattcactggtacaaaacactttgcagctg
gtgagaaggcaataaaaagttgatttttaaactcattactataaattattcttacagtac
tttgcaaattcagaatttcaaactgcatgttctttttctaaattgcccacagtactcgag
gttcctgaagctaaggcagctgtttcagaggagggggargaagtaycaaatytcwaggga
tttccatttctctttccatgccgamatacttcagggcatcagcctgactgtmtctgtaat
caaaaaacakctcttcgccavtctggatggctctctyggcaaaaatacctatcctgtgat
caccgttaaccatcataacttttgcatagcattt