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comparison tools/sr_assembly/mira.txt @ 6:3e7eca1f5d04 draft

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MIRA wrapper v0.0.5 with <version_command> support and check for MIRA V3.4
author peterjc
date Fri, 01 Feb 2013 10:34:21 -0500
parents 216bf640baaf
children 4d3f94dfb857
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5:216bf640baaf 6:3e7eca1f5d04
39 (some other switches changed, e.g. -OUT rrol to rrot, which 39 (some other switches changed, e.g. -OUT rrol to rrot, which
40 means the wrapper no longer works with MIRA 3.2.x) 40 means the wrapper no longer works with MIRA 3.2.x)
41 - The contig summary file (TCS file) was removed in MIRA 3.4 41 - The contig summary file (TCS file) was removed in MIRA 3.4
42 - Report all missing output files (not just first missing one) 42 - Report all missing output files (not just first missing one)
43 v0.0.4 - Fix problem with backbone arguments inroduced in v0.0.3 43 v0.0.4 - Fix problem with backbone arguments inroduced in v0.0.3
44 v0.0.5 - Implement the <version_command> tag to record the wrapper
45 version and the MIRA version being used.
46 - Check using MIRA 3.4 (later versions have a different API)
44 47
45 48
46 Developers 49 Developers
47 ========== 50 ==========
48 51