Mercurial > repos > peterjc > mummer
diff tools/mummer/mummer.xml @ 1:b07aa90c95e6 draft
Uploaded v0.0.2, corrects typo on tool ID, adds citation markup.
author | peterjc |
---|---|
date | Tue, 28 Oct 2014 06:57:35 -0400 |
parents | b0551f2a5986 |
children | 8f93c1b7609e |
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--- a/tools/mummer/mummer.xml Mon Oct 27 12:56:55 2014 -0400 +++ b/tools/mummer/mummer.xml Tue Oct 28 06:57:35 2014 -0400 @@ -1,5 +1,5 @@ -<tool id="mumer_wrapper" name="MUMmer" version="0.0.1"> - <description>Draw dotplot with mummer/nucmer/promer/mummerplot</description> +<tool id="mummerplot_wrapper" name="MUMmer dotplot" version="0.0.2"> + <description>Combine mummer/nucmer/promer with mummerplot</description> <requirements> <requirement type="binary">ps2pdf</requirement> <requirement type="binary">nucmer</requirement> @@ -43,8 +43,8 @@ <help> **What it does** -Takes two FASTA files (*species A* and *species B*), compairs them using one -of the MUMmer 3 tools (``mummer``, ``nucmer``, or ``promer``), comparing both +Takes two FASTA files (*species A* and *species B*), compares them using one +of the MUMmer 3 tools (``mummer``, ``nucmer``, or ``promer``), checking both strands, and then draws a dotplot using ``mummerplot``. The full MUMmer suite is more flexible and capable than this limited wrapper. @@ -65,4 +65,7 @@ This wrapper is available to install into other Galaxy Instances via the Galaxy Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/mummer </help> + <citations> + <citation type="doi">10.1186/gb-2004-5-2-r12</citation> + </citations> </tool>