Mercurial > repos > peterjc > package_mira_4_9_5
view tool_dependencies.xml @ 2:edb0eb8d8921 draft
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/packages/package_mira_4_9_5 commit 5119676eacf458914b8ae266fad36f8f4771bd9b
author | peterjc |
---|---|
date | Wed, 02 Sep 2015 06:47:20 -0400 |
parents | c78bf8ce02e2 |
children | 4eaac2545faa |
line wrap: on
line source
<?xml version="1.0"?> <tool_dependency> <package name="MIRA" version="4.9.5"> <install version="1.0"> <actions_group> <!-- Download the binaries for MIRA compatible with 64-bit OSX. --> <actions architecture="x86_64" os="darwin"> <action type="download_by_url">http://downloads.sourceforge.net/project/mira-assembler/MIRA/development/mira_4.9.5_2_darwin14.3.0_x86_64_static.tar.bz2</action> <action type="move_directory_files"> <source_directory>bin</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> </actions> <!-- Download the binaries for MIRA compatible with 64-bit Linux. --> <actions architecture="x86_64" os="linux"> <action type="download_by_url">http://downloads.sourceforge.net/project/mira-assembler/MIRA/development/mira_4.9.5_2_linux-gnu_x86_64_static.tar.bz2</action> <action type="move_directory_files"> <source_directory>bin</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> </actions> <!-- This actions tag is only processed if none of the above tags resulted in a successful installation. --> <actions> <action type="shell_command">echo "ERROR: Automated installation on your operating system and CPU architecture combination is not yet supported."</action> <action type="shell_command">echo "Your machine details (the output from 'uname' and 'arch'):"</action> <action type="shell_command">uname</action> <action type="shell_command">arch</action> <action type="shell_command">echo "If pre-compiled MIRA binaries are now available for this, please report this"</action> <action type="shell_command">echo "via https://github.com/peterjc/pico_galaxy/issues - thank you!"</action> <action type="shell_command">false</action> <!-- The 'false' command will return an error, so Galaxy should treat this as a failed install --> </actions> <!-- The $PATH environment variable is only set if one of the above <actions> tags resulted in a successful installation. --> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable> </action> <!-- Wrapper requires trailing slash on $MIRA4_9 so make sure there is one (double trailing slash is harmless) --> <action type="set_environment"> <environment_variable action="set_to" name="MIRA4_9">$INSTALL_DIR/</environment_variable> </action> </actions_group> </install> <readme> Downloads MIRA v4.9.5 from Sourceforge, requesting Bastien's precompiled binaries for 64 bit (x86_64) Linux or Mac OS X. Other platforms where compilation from source would be required (e.g. 32 bit Linux) are not supported by this automated installation script. http://chevreux.org/projects_mira.html http://sourceforge.net/projects/mira-assembler/ The environment variable ``$MIRA4_9`` will point to the folder containing the binaries, which is also pre-pended to the``$PATH`` variable. </readme> </package> </tool_dependency>