Mercurial > repos > peterjc > sample_seqs

comparison tools/sample_seqs/sample_seqs.xml @ 9:5f505ed46e16 draft

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Bump Biopython dependency
author peterjc
date Thu, 30 Nov 2023 09:50:46 +0000
parents 86710edcec02
children
comparison
equal deleted inserted replaced
8:7c40a1fbc82e 9:5f505ed46e16
1 <tool id="sample_seqs" name="Sub-sample sequences files" version="0.2.5"> 1 <tool id="sample_seqs" name="Sub-sample sequences files" version="0.2.6">
2 <description>e.g. to reduce coverage</description> 2 <description>e.g. to reduce coverage</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.67">biopython</requirement> 4 <requirement type="package" version="1.81">biopython</requirement>
5 </requirements> 5 </requirements>
6 <version_command> 6 <version_command>
7 python $__tool_directory__/sample_seqs.py --version 7 python $__tool_directory__/sample_seqs.py --version
8 </version_command> 8 </version_command>
9 <command detect_errors="aggressive"> 9 <command detect_errors="aggressive">
233 This tool uses Biopython, so if you use this Galaxy tool in work leading to a 233 This tool uses Biopython, so if you use this Galaxy tool in work leading to a
234 scientific publication please cite the following paper: 234 scientific publication please cite the following paper:
235 235
236 Cock et al (2009). Biopython: freely available Python tools for computational 236 Cock et al (2009). Biopython: freely available Python tools for computational
237 molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3. 237 molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3.
238 http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878. 238 https://doi.org/10.1093/bioinformatics/btp163 pmid:19304878.
239 239
240 This tool is available to install into other Galaxy Instances via the Galaxy 240 This tool is available to install into other Galaxy Instances via the Galaxy
241 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/sample_seqs 241 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/sample_seqs
242 </help> 242 </help>
243 <citations> 243 <citations>