Mercurial > repos > peterjc > seq_primer_clip
diff tools/seq_primer_clip/README.rst @ 5:530c8d6fedd8 draft
v0.0.15 - internal changes
author | peterjc |
---|---|
date | Wed, 10 May 2017 13:09:52 -0400 |
parents | 9b074c1db68e |
children | b9dc7c967ee6 |
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--- a/tools/seq_primer_clip/README.rst Thu Feb 02 11:52:37 2017 -0500 +++ b/tools/seq_primer_clip/README.rst Wed May 10 13:09:52 2017 -0400 @@ -69,8 +69,10 @@ - Reorder XML elements (internal change only). - Planemo for Tool Shed upload (``.shed.yml``, internal change only). - Fixed input file help text. -v0.0.14 - Updated to point at Biopython 1.67 (latest version in Tool Shed). +v0.0.14 - Depends on Biopython 1.67 via legacy Tool Shed package or bioconda. - Explicit dependency on ``galaxy_sequence_utils``. +v0.0.15 - Use ``<command detect_errors="aggressive">`` (internal change only). + - Single quote command line arguments (internal change only) ======= ====================================================================== @@ -89,17 +91,17 @@ Planemo commands (which requires you have set your Tool Shed access details in ``~/.planemo.yml`` and that you have access rights on the Tool Shed):: - $ planemo shed_update -t testtoolshed --check_diff ~/repositories/pico_galaxy/tools/seq_primer_clip/ + $ planemo shed_update -t testtoolshed --check_diff tools/seq_primer_clip/ ... or:: - $ planemo shed_update -t toolshed --check_diff ~/repositories/pico_galaxy/tools/seq_primer_clip/ + $ planemo shed_update -t toolshed --check_diff tools/seq_primer_clip/ ... To just build and check the tar ball, use:: - $ planemo shed_upload --tar_only ~/repositories/pico_galaxy/tools/seq_primer_clip/ + $ planemo shed_upload --tar_only tools/seq_primer_clip/ ... $ tar -tzf shed_upload.tar.gz test-data/MID4_GLZRM4E04_rnd30.fasta