Mercurial > repos > peterjc > tmhmm_and_signalp
comparison tools/protein_analysis/signalp3.xml @ 21:238eae32483c draft
"Check this is up to date with all 2020 changes (black etc)"
author | peterjc |
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date | Thu, 17 Jun 2021 08:21:06 +0000 |
parents | a19b3ded8f33 |
children | e1996f0f4e85 |
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166 cite the following papers: | 166 cite the following papers: |
167 | 167 |
168 Peter J.A. Cock, Björn A. Grüning, Konrad Paszkiewicz and Leighton Pritchard (2013). | 168 Peter J.A. Cock, Björn A. Grüning, Konrad Paszkiewicz and Leighton Pritchard (2013). |
169 Galaxy tools and workflows for sequence analysis with applications | 169 Galaxy tools and workflows for sequence analysis with applications |
170 in molecular plant pathology. PeerJ 1:e167 | 170 in molecular plant pathology. PeerJ 1:e167 |
171 http://dx.doi.org/10.7717/peerj.167 | 171 https://doi.org/10.7717/peerj.167 |
172 | 172 |
173 Bendtsen, Nielsen, von Heijne, and Brunak (2004). | 173 Bendtsen, Nielsen, von Heijne, and Brunak (2004). |
174 Improved prediction of signal peptides: SignalP 3.0. | 174 Improved prediction of signal peptides: SignalP 3.0. |
175 J. Mol. Biol., 340:783-795. | 175 J. Mol. Biol., 340:783-795. |
176 http://dx.doi.org/10.1016/j.jmb.2004.05.028 | 176 https://doi.org/10.1016/j.jmb.2004.05.028 |
177 | 177 |
178 Nielsen, Engelbrecht, Brunak and von Heijne (1997). | 178 Nielsen, Engelbrecht, Brunak and von Heijne (1997). |
179 Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. | 179 Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. |
180 Protein Engineering, 10:1-6. | 180 Protein Engineering, 10:1-6. |
181 http://dx.doi.org/10.1093/protein/10.1.1 | 181 https://doi.org/10.1093/protein/10.1.1 |
182 | 182 |
183 Nielsen and Krogh (1998). | 183 Nielsen and Krogh (1998). |
184 Prediction of signal peptides and signal anchors by a hidden Markov model. | 184 Prediction of signal peptides and signal anchors by a hidden Markov model. |
185 Proceedings of the Sixth International Conference on Intelligent Systems for Molecular Biology (ISMB 6), | 185 Proceedings of the Sixth International Conference on Intelligent Systems for Molecular Biology (ISMB 6), |
186 AAAI Press, Menlo Park, California, pp. 122-130. | 186 AAAI Press, Menlo Park, California, pp. 122-130. |