Mercurial > repos > peterjc > tmhmm_and_signalp
comparison tools/protein_analysis/tmhmm2.py @ 23:e1996f0f4e85 draft default tip
"v0.2.13 - Python 3 fix for raising StopIteration"
author | peterjc |
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date | Thu, 17 Jun 2021 17:59:33 +0000 |
parents | 238eae32483c |
children |
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22:e1afa4b0b682 | 23:e1996f0f4e85 |
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50 from seq_analysis_utils import run_jobs, split_fasta, thread_count | 50 from seq_analysis_utils import run_jobs, split_fasta, thread_count |
51 | 51 |
52 FASTA_CHUNK = 500 | 52 FASTA_CHUNK = 500 |
53 | 53 |
54 if "-v" in sys.argv or "--version" in sys.argv: | 54 if "-v" in sys.argv or "--version" in sys.argv: |
55 sys.exit("TMHMM wrapper version 0.0.16") | 55 sys.exit("TMHMM wrapper version 0.0.17") |
56 | 56 |
57 if len(sys.argv) != 4: | 57 if len(sys.argv) != 4: |
58 sys.exit( | 58 sys.exit( |
59 "Require three arguments, number of threads (int), input protein " | 59 "Require three arguments, number of threads (int), input protein " |
60 "FASTA file & output tabular file" | 60 "FASTA file & output tabular file" |