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comparison dante_gff_to_tabular.xml @ 12:ddc6bab20889 draft

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author petr-novak
date Thu, 15 Aug 2019 07:20:12 -0400
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children e2bbc79f0fac
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11:1d5883a9ec3a 12:ddc6bab20889
1 <tool id="gff_to_tabular" name="Convert dante gff3 to tab delimited file" version="0.1.0" python_template_version="3.5">
2 <requirements>
3 <requirement type="package">R</requirement>
4 </requirements>
5 <command detect_errors="exit_code"><![CDATA[
6 Rscript ${__tool_directory__}/summarize_gff.R '$inputgff' '$output'
7 ]]></command>
8 <inputs>
9 <param type="data" name="inputgff" format="gff3" />
10 </inputs>
11 <outputs>
12 <data name="output" format="tabular" />
13 </outputs>
14 <help><![CDATA[
15 TODO: Fill in help.
16 ]]></help>
17 </tool>