Mercurial > repos > petr-novak > dante

comparison dante_gff_to_dna.xml @ 24:df99812ded92 draft

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"planemo upload commit a0a9b02c60a91942a271b8b35648c0b152fe1ebd-dirty"
author petr-novak
date Fri, 27 Jan 2023 08:15:31 +0000
parents e2bbc79f0fac
children 02c6dff8c381
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23:e2bbc79f0fac 24:df99812ded92
1 <tool id="domains_extract" name="Extract Domains Nucleotide Sequences" version="1.1.4"> 1 <tool id="domains_extract" name="Extract Domains Nucleotide Sequences" version="1.1.5">
2 <description> Tool to extract nucleotide sequences of protein domains found by DANTE </description> 2 <description> Tool to extract nucleotide sequences of protein domains found by DANTE </description>
3 <requirements> 3 <requirements>
4 <requirement type="package">dante=0.1.4</requirement> 4 <requirement type="package">dante=0.1.5</requirement>
5 </requirements> 5 </requirements>
6 <command> 6 <command>
7 TEMP_DIR_LINEAGES=\$(mktemp -d) &amp;&amp; 7 TEMP_DIR_LINEAGES=\$(mktemp -d) &amp;&amp;
8 /mnt/raid/users/petr/workspace/dante/dante_gff_to_dna.py --domains_gff ${domains_gff} --input_dna ${input_dna} --out_dir \$TEMP_DIR_LINEAGES 8 /mnt/raid/users/petr/workspace/dante/dante_gff_to_dna.py --domains_gff ${domains_gff} --input_dna ${input_dna} --out_dir \$TEMP_DIR_LINEAGES
9 9