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comparison dante_gff_to_dna.xml @ 31:ae4cebdccf74 draft default tip

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planemo upload commit 0e706a5b6d79e3b33bdc226d806f0fefe718c57f-dirty
author petr-novak
date Wed, 29 Jan 2025 12:49:00 +0000
parents f0663cdbae66
children
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30:f0663cdbae66 31:ae4cebdccf74
1 <tool id="domains_extract" name="Extract Domains Nucleotide Sequences" version="2.5.1"> 1 <tool id="domains_extract" name="Extract Domains Nucleotide Sequences" version="2.6.1">
2 <description> Tool to extract nucleotide sequences of protein domains found by DANTE </description> 2 <description> Tool to extract nucleotide sequences of protein domains found by DANTE </description>
3 <requirements> 3 <requirements>
4 <requirement type="package">dante=0.2.5</requirement> 4 <requirement type="package">dante=0.2.6</requirement>
5 </requirements> 5 </requirements>
6 <command> 6 <command>
7 TEMP_DIR_LINEAGES=\$(mktemp -d) &amp;&amp; 7 TEMP_DIR_LINEAGES=\$(mktemp -d) &amp;&amp;
8 dante_gff_to_dna.py --domains_gff ${domains_gff} --input_dna ${input_dna} --out_dir \$TEMP_DIR_LINEAGES 8 dante_gff_to_dna.py --domains_gff ${domains_gff} --input_dna ${input_dna} --out_dir \$TEMP_DIR_LINEAGES
9 9