diff dante.xml @ 24:df99812ded92 draft

"planemo upload commit a0a9b02c60a91942a271b8b35648c0b152fe1ebd-dirty"
author petr-novak
date Fri, 27 Jan 2023 08:15:31 +0000
parents e2bbc79f0fac
children 74babe57d739
line wrap: on
line diff
--- a/dante.xml	Wed Jan 25 13:06:55 2023 +0000
+++ b/dante.xml	Fri Jan 27 08:15:31 2023 +0000
@@ -1,7 +1,7 @@
-<tool id="dante" name="Domain based ANnotation of Transposable Elements - DANTE" version="1.1.4">
+<tool id="dante" name="Domain based ANnotation of Transposable Elements - DANTE" version="1.1.5">
   <description> Tool for annotation of transposable elements based on the similarity to conserved protein domains database. </description>
   <requirements>
-    <requirement type="package">dante=0.1.4</requirement>
+    <requirement type="package">dante=0.1.5</requirement>
   </requirements>
   <stdio>
     <regex match="Traceback" source="stderr" level="fatal" description="Unknown error" />
@@ -17,12 +17,10 @@
     #end if
     &amp;&amp;
 
-
     dante --query \${INPUT_SEQUENCES} --domain_gff ${DomGff}
 	  --database $database
       --scoring_matrix ${scoring_matrix}
-
-    &amp;&amp;
+      --cpu \${GALAXY_SLOTS:-1}
     dante_gff_output_filtering.py --dom_gff ${DomGff}
     --domains_prot_seq ${Domains_filtered} --domains_filtered ${DomGff_filtered}
     --output_dir .