# HG changeset patch
# User petr-novak
# Date 1738154940 0
# Node ID ae4cebdccf74a44fee1d8276d3b0eed7a83a285a
# Parent  f0663cdbae664f5bff0d089704b7cadd6a514cf8
planemo upload commit 0e706a5b6d79e3b33bdc226d806f0fefe718c57f-dirty

diff -r f0663cdbae66 -r ae4cebdccf74 dante.xml
--- a/dante.xml	Tue Nov 05 15:14:35 2024 +0000
+++ b/dante.xml	Wed Jan 29 12:49:00 2025 +0000
@@ -1,7 +1,7 @@
-<tool id="dante" name="Domain based ANnotation of Transposable Elements - DANTE" version="2.5.1">
+<tool id="dante" name="Domain based ANnotation of Transposable Elements - DANTE" version="2.6.1">
   <description> Tool for annotation of transposable elements based on the similarity to conserved protein domains database. </description>
   <requirements>
-    <requirement type="package">dante=0.2.5</requirement>
+    <requirement type="package">dante=0.2.6</requirement>
   </requirements>
   <stdio>
     <regex match="Traceback" source="stderr" level="fatal" description="Unknown error" />
diff -r f0663cdbae66 -r ae4cebdccf74 dante_gff_output_filtering.xml
--- a/dante_gff_output_filtering.xml	Tue Nov 05 15:14:35 2024 +0000
+++ b/dante_gff_output_filtering.xml	Wed Jan 29 12:49:00 2025 +0000
@@ -1,7 +1,7 @@
-<tool id="domains_filter" name="Protein Domains Filter" version="2.5.1">
+<tool id="domains_filter" name="Protein Domains Filter" version="2.6.1">
   <description> Tool for filtering of gff3 output from DANTE. Filtering can be performed based domain type and alignment quality. </description>
     <requirements>
-        <requirement type="package">dante=0.2.5</requirement>
+        <requirement type="package">dante=0.2.6</requirement>
     </requirements>
     <stdio>
         <regex match="Traceback" source="stderr" level="fatal" description="Unknown error" />
diff -r f0663cdbae66 -r ae4cebdccf74 dante_gff_to_dna.xml
--- a/dante_gff_to_dna.xml	Tue Nov 05 15:14:35 2024 +0000
+++ b/dante_gff_to_dna.xml	Wed Jan 29 12:49:00 2025 +0000
@@ -1,7 +1,7 @@
-<tool id="domains_extract" name="Extract Domains Nucleotide Sequences" version="2.5.1">
+<tool id="domains_extract" name="Extract Domains Nucleotide Sequences" version="2.6.1">
   <description> Tool to extract nucleotide sequences of protein domains found by DANTE </description>
   <requirements>
-    <requirement type="package">dante=0.2.5</requirement>
+    <requirement type="package">dante=0.2.6</requirement>
   </requirements>
   <command>
     TEMP_DIR_LINEAGES=\$(mktemp -d) &amp;&amp;
diff -r f0663cdbae66 -r ae4cebdccf74 dante_gff_to_tabular.xml
--- a/dante_gff_to_tabular.xml	Tue Nov 05 15:14:35 2024 +0000
+++ b/dante_gff_to_tabular.xml	Wed Jan 29 12:49:00 2025 +0000
@@ -1,6 +1,6 @@
-<tool id="gff_to_tabular" name="Convert dante gff3 to tab delimited file" version="2.5.1" python_template_version="3.5">
+<tool id="gff_to_tabular" name="Convert dante gff3 to tab delimited file" version="2.6.1" python_template_version="3.5">
     <requirements>
-        <requirement type="package">dante=0.2.5</requirement>
+        <requirement type="package">dante=0.2.6</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
         summarize_gff.R '$inputgff' '$output'
diff -r f0663cdbae66 -r ae4cebdccf74 summarize_gff.xml
--- a/summarize_gff.xml	Tue Nov 05 15:14:35 2024 +0000
+++ b/summarize_gff.xml	Wed Jan 29 12:49:00 2025 +0000
@@ -1,6 +1,6 @@
-<tool id="gff_summary" name="Summarize gff3 output from DANTE" version="2.5.1" python_template_version="3.5">
+<tool id="gff_summary" name="Summarize gff3 output from DANTE" version="2.6.1" python_template_version="3.5">
     <requirements>
-        <requirement type="package">dante=0.2.5</requirement>
+        <requirement type="package">dante=0.2.6</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
         summarize_gff.R '$inputgff' '$output' '$group'