Mercurial > repos > petr-novak > dante_ltr

view databases/lineage_domain_order.csv @ 0:7b0bbe7477c4 draft

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"planemo upload commit 92c684dff3b377c8c08654c7f3d46a133385e3e0-dirty"
author petr-novak
date Tue, 08 Mar 2022 13:24:33 +0000
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children 0c3111ab729b
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Lineage	Domains order	offset5prime	offset3prime
Class_I/LTR/Ty1_copia/Ale	GAG PROT INT RT RH	2000	2000
Class_I/LTR/Ty1_copia/Alesia	GAG PROT INT RT RH	2000	3000
Class_I/LTR/Ty1_copia/Angela	GAG PROT INT RT RH	4000	6000
Class_I/LTR/Ty1_copia/Bianca	GAG PROT INT RT RH	2000	3000
Class_I/LTR/Ty1_copia/Bryco	GAG PROT INT RT RH	2000	3000
Class_I/LTR/Ty1_copia/Gymco-I	GAG PROT INT RT RH	2000	2500
Class_I/LTR/Ty1_copia/Gymco-II	GAG PROT INT RT RH	4000	2000
Class_I/LTR/Ty1_copia/Gymco-III	GAG PROT INT RT RH	2000	2000
Class_I/LTR/Ty1_copia/Gymco-IV	GAG PROT INT RT RH	2000	2000
Class_I/LTR/Ty1_copia/Ikeros	GAG PROT INT RT RH	2000	5000
Class_I/LTR/Ty1_copia/Ivana	GAG PROT INT RT RH	2000	2000
Class_I/LTR/Ty1_copia/Lyco	GAG PROT INT RT RH	2000	2000
Class_I/LTR/Ty1_copia/Osser	GAG PROT INT RT RH	2000	2000
Class_I/LTR/Ty1_copia/SIRE	GAG PROT INT RT RH	7000	4000
Class_I/LTR/Ty1_copia/TAR	GAG PROT INT RT RH	4000	3000
Class_I/LTR/Ty1_copia/Tork	GAG PROT INT RT RH	2000	3000
Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir	GAG PROT RT RH INT CHD	2000	4000
Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass	GAG PROT RT RH INT CHD	5000	5000
Class_I/LTR/Ty3_gypsy/chromovirus/CRM	GAG PROT RT RH INT CHDCR	6000	3000
Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel	GAG PROT RT RH INT CHD	3000	3000
Class_I/LTR/Ty3_gypsy/chromovirus/Reina	GAG PROT RT RH INT CHD	2000	2000
Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1	GAG PROT RT RH INT CHD	2000	2000
Class_I/LTR/Ty3_gypsy/chromovirus/Tekay	GAG PROT RT RH INT CHD	6000	6000
Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila	GAG PROT RT RH INT	4000	9000
Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Ogre	GAG PROT RT RH aRH INT	10000	15000
Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand	GAG PROT RT RH aRH INT	4000	15000
Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/TatI	GAG PROT aRH RT RH INT	5000	5000
Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/TatII	GAG PROT aRH RT RH INT	5000	5000
Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/TatIII	GAG PROT RT RH INT aRH	10000	10000
Class_I/LTR/Ty3_gypsy/non-chromovirus/Phygy	GAG PROT RT RH INT	4000	4000
Class_I/LTR/Ty3_gypsy/non-chromovirus/Selgy	GAG PROT RT RH INT	2000	2000