Mercurial > repos > petr-novak > get_organelle

comparison get_organelle.xml @ 5:513350816e4a draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit a17736d0821e1f8366f416ea2cc6874851a74c26-dirty"
author petr-novak
date Wed, 01 Jun 2022 07:12:19 +0000
parents a388d670fd54
children
comparison
equal deleted inserted replaced
4:b9297a39531a 5:513350816e4a
26 <option value="fungus_nr">Fungus ribosomal RNA </option> 26 <option value="fungus_nr">Fungus ribosomal RNA </option>
27 </param> 27 </param>
28 </inputs> 28 </inputs>
29 <outputs> 29 <outputs>
30 <data name="assembly_contigs" format="fasta" label="Assembly from ${on_string} using ${ref_db} database (contigs)" /> 30 <data name="assembly_contigs" format="fasta" label="Assembly from ${on_string} using ${ref_db} database (contigs)" />
31 <data name="assembly_zip" format="fasta" label="Assembly from ${on_string} using ${ref_db} database (full results as archive)" /> 31 <data name="assembly_zip" format="zip" label="Assembly from ${on_string} using ${ref_db} database (full results as archive)" />
32 </outputs> 32 </outputs>
33 <help><![CDATA[ 33 <help><![CDATA[
34 This toolkit assemblies organelle genome from genomic skimming data. 34 This toolkit assemblies organelle genome from genomic skimming data.
35 35
36 Citation: Jian-Jun Jin*, Wen-Bin Yu*, Jun-Bo Yang, Yu Song, Claude W. dePamphilis, Ting-Shuang Yi, De-Zhu Li. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biology 21, 241 (2020). https://doi.org/10.1186/s13059-020-02154-5 36 Citation: Jian-Jun Jin*, Wen-Bin Yu*, Jun-Bo Yang, Yu Song, Claude W. dePamphilis, Ting-Shuang Yi, De-Zhu Li. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biology 21, 241 (2020). https://doi.org/10.1186/s13059-020-02154-5