# HG changeset patch
# User petr-novak
# Date 1653994612 0
# Node ID 0ff5b94932fe3b76d87de88c2d450b0846aef69f
"planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
diff -r 000000000000 -r 0ff5b94932fe README.md
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/README.md Tue May 31 10:56:52 2022 +0000
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+# get_Organelle_galaxy_wraper
+
+this repository provide getOrganelle tool for Galaxy server. As dependency it used reference database https://github.com/Kinggerm/GetOrganelleDB. The copy of database is installed from repositories https://github.com/kavonrtep/getorganelledb and this dependency is defined in https://github.com/kavonrtep/package_getorganelledb_0_0_1.
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+Package can be installed from Galaxy toolshed.
+
+List of components:
+- tool definition: this repository
+ - source - this repository
+ - toolshed - .......
+- dependency package:
+ - source https://github.com/kavonrtep/package_getorganelledb_0_0_1
+ - toolshed package
+- database location - https://github.com/kavonrtep/getorganelledb
diff -r 000000000000 -r 0ff5b94932fe get_organelle.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/get_organelle.xml Tue May 31 10:56:52 2022 +0000
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+ getOrganelle
+ getorganelledb
+ GETORGANELLEDB
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+ ${assembly_contigs} &&
+ zip -r assembly.zip assembly_dir &&
+ mv assembly.zip ${assembly_zip}
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+
+ ]]>
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diff -r 000000000000 -r 0ff5b94932fe tool_dependencies.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml Tue May 31 10:56:52 2022 +0000
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+ getorganelle reference database
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