Mercurial > repos > petr-novak > long_reads_sampling
comparison long_reads_sampling.xml @ 2:ccaedca97e5e draft
planemo upload for repository https://github.com/kavonrtep/galaxy_tools commit 2b3bc2334397749509cdf6fc432d891a09763c4f-dirty
author | petr-novak |
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date | Fri, 08 Dec 2023 09:17:46 +0000 |
parents | 5596bafd2119 |
children | 9819570dc020 |
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1:5596bafd2119 | 2:ccaedca97e5e |
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1 <tool id="long_reads_sampling" name="Create sample of long reads" version="0.1.0"> | 1 <tool id="long_reads_sampling" name="Create sample of long reads" version="0.1.0"> |
2 <requirements> | 2 <requirements> |
3 <requirement type="package">biopython</requirement> | 3 <requirement type="package">biopython</requirement> |
4 <requirement type="package" version="3.6" >python</requirement> | 4 <requirement type="package" version="3.6" >python</requirement> |
5 <requirement type="literal" path="long2short.py"/> | |
5 </requirements> | 6 </requirements> |
6 <command detect_errors="exit_code"><![CDATA[ | 7 <command detect_errors="exit_code"><![CDATA[ |
7 python3 $__tool_directory__/long_reads_sampling.py -i "$input1" -o "$output1" -l ${total_length} -s ${seed} | 8 python3 $__tool_directory__/long_reads_sampling.py -i "$input1" -o "$output1" -l ${total_length} -s ${seed} |
8 ]]></command> | 9 ]]></command> |
9 <inputs> | 10 <inputs> |