Mercurial > repos > petr-novak > long_reads_sampling

diff long_reads_sampling.py @ 2:ccaedca97e5e draft
planemo upload for repository https://github.com/kavonrtep/galaxy_tools commit 2b3bc2334397749509cdf6fc432d891a09763c4f-dirty
author: petr-novak
date: Fri, 08 Dec 2023 09:17:46 +0000 (17 months ago)
parents: dd46956ff61f
--- a/long_reads_sampling.py	Tue Dec 12 04:33:04 2017 -0500
+++ b/long_reads_sampling.py	Fri Dec 08 09:17:46 2023 +0000
@@ -57,7 +57,6 @@
         cummulative_length += seq_summary.id_length[seq_id]
         if cummulative_length >= args.total_length:
             break
-    print(selected_seq_id)
     # to make it efficient same orger is necesary
     selected_seq_id_ordered = [i
                                for i in seq_summary.id_length
@@ -91,6 +90,9 @@
               file=sys.stderr)
         sys.exit(1)
 
+    print("input sequence info")
+    print("total length: ", seq_summary.total_length)
+    print("number of sequences: ", seq_summary.number_of_sequence)
     make_sequence_sample(args, seq_summary)