comparison tool_dependencies.xml @ 9:1af2bcd7e8fd draft

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author petr-novak
date Thu, 27 Jun 2019 07:08:14 -0400
parents 7650b37f9a30
children e88fe2bb9f79
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8:7650b37f9a30 9:1af2bcd7e8fd
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="profrep_databases" version="1.0"> 3 <package name="profrep_databases" version="1.0">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="make_directory">$INSTALL_DIR/test</action>
7 <action type="make_directory">$INSTALL_DIR/test2</action>
6 <action type="download_file">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.9.tar.bz2</action> 8 <action type="download_file">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.9.tar.bz2</action>
7 <action type="move_file">
8 <source>bwa-0.5.9.tar.bz2</source>
9 <destination>$INSTALL_DIR</destination>
10 </action>
11 <action type="shell_command">git clone https://bitbucket.org/petrnovak/re_databases.git</action>
12 <action type="move_directory_files">
13 <source_directory>re_databases</source_directory>
14 <destination_directory>$INSTALL_DIR</destination_directory>
15 </action>
16 </actions> 9 </actions>
17 </install> 10 </install>
18 <readme> 11 <readme>
19 Profrep databases 12 Profrep databases
20 </readme> 13 </readme>