--- a/pairScan.xml	Mon Dec 09 04:14:48 2019 -0500
+++ b/pairScan.xml	Fri Jan 31 06:55:23 2020 -0500
@@ -1,6 +1,6 @@
 
-<tool id="pairScan" name="Scan paired reads for overlap" version="1.0.0">
-  <description> Scan paired reads for overlap </description>
+<tool id="pairScan" name="Scan paired-end reads for overlap" version="1.0.0">
+  <description> Scan paired-end reads for overlap </description>
   <requirements>
     <requirement type="package">python-levenshtein</requirement>
   </requirements>
@@ -9,8 +9,8 @@
   </command>
 
   <inputs>
-    <param format="fasta" type="data" name="fasta_input" label="sequences in fasta format" />
-    <param name="min_overlap" type="integer" size="3" value="30" min="20" max="100" label="minimum overlap length [nt] " />
+    <param format="fasta" type="data" name="fasta_input" label="Reads in FASTA format" />
+    <param name="min_overlap" type="integer" size="3" value="30" min="20" max="100" label="Minimum overlap length [nt] " />
     <param name="max_mismatch" type="select" label="Maximum number of mismatches per 100 bp">
       <option value="0">0</option>
       <option value="1" selected="true">1</option>
@@ -38,8 +38,8 @@
 
 
   <outputs>
-    <data format="fasta" name="pass" label="pairs with no overlap from dataset ${fasta_input.hid}"/>
-   	<data format="fasta" name="bad" label="overlaping pairs from dataset ${fasta_input.hid}"/>
+    <data format="fasta" name="pass" label="Pairs with no overlap from dataset ${fasta_input.hid}"/>
+   	<data format="fasta" name="bad" label="Overlaping pairs from dataset ${fasta_input.hid}"/>
   </outputs>
 
   <help>