# HG changeset patch
# User petr-novak
# Date 1695713284 0
# Node ID 755a4d6431842eae4b0dfcae17f2d327d41998b5
# Parent  5366d5ea04bc0a2dcecd07708e1feacb0237e514
planemo upload commit a61591d548f42ff417781e7fe7418dc2901ccc23

diff -r 5366d5ea04bc -r 755a4d643184 repeat_annotate_custom.xml
--- a/repeat_annotate_custom.xml	Fri Aug 04 12:35:32 2023 +0000
+++ b/repeat_annotate_custom.xml	Tue Sep 26 07:28:04 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="repeat_annotate" name="Library Based Assembly Annotation" version="0.1.6" python_template_version="3.5">
+<tool id="repeat_annotate" name="Library Based Assembly Annotation" version="0.1.7" python_template_version="3.5">
     <requirements>
         <requirement type="package" version="4.1.2.p1">repeatmasker</requirement>
         <requirement type="package">bioconductor-rtracklayer</requirement>
@@ -30,7 +30,7 @@
             <option value="-s">Slow search, more sensitive </option>
             <option value="-q">Quick search, less sensitive </option>
         </param>
-        <param argument="-nolow" type="boolean" truevalue="" falsevalue="-nolow" checked="false" label="Perform masking of low complexity and simple repeats" />
+        <param argument="-nolow" type="boolean" truevalue="" falsevalue="-nolow" checked="true" label="Perform masking of low complexity and simple repeats" />
     </inputs>
     <outputs>
         <data name="output1" format="gff3"  label="Repeat Annotation (GFF3) on ${on_string}"/>