Mercurial > repos > petr-novak > repeat_annotation_pipeline3

changeset 10:276efc4cb17f draft

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Uploaded
author petr-novak
date Thu, 04 May 2023 09:27:43 +0000
parents 4a068d23fda6
children 5366d5ea04bc
files repeat_annotate_custom.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/repeat_annotate_custom.xml	Wed May 03 11:19:06 2023 +0000
+++ b/repeat_annotate_custom.xml	Thu May 04 09:27:43 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="repeat_annotate" name="Library Based Assembly Annotation" version="0.1.3" python_template_version="3.5">
+<tool id="repeat_annotate" name="Library Based Assembly Annotation" version="0.1.5" python_template_version="3.5">
     <requirements>
         <requirement type="package" version="4.1.2.p1">repeatmasker</requirement>
         <requirement type="package">bioconductor-rtracklayer</requirement>
@@ -27,7 +27,7 @@
             <option value="-s">Slow search, more sensitive </option>
             <option value="-q">Quick search, less sensitive </option>
         </param>
-        <param argument="-nolow" type="boolean" truevalue="-nolow" falsevalue="" checked="true" label="Perform masking of low complexity and simple repeats" />
+        <param argument="-nolow" type="boolean" truevalue="-nolow" falsevalue="" checked="false" label="Perform masking of low complexity and simple repeats" />
     </inputs>
     <outputs>
         <data name="output1" format="gff3"  label="Repeat Annotation (GFF3) on ${on_string}"/>