Mercurial > repos > petr-novak > repeatexplorer2_cerit
comparison repex_tarean.xml @ 6:ed5a72d4693d draft
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author | petr-novak |
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date | Fri, 27 May 2022 12:00:03 +0000 |
parents | d89d4fa8a17b |
children | a93b7e080db4 |
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5:5e592edbad95 | 6:ed5a72d4693d |
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1 <tool id="tarean" name="Tandem Repeat Analyzer" version="2.3.8" > | 1 <tool id="tarean" name="Tandem Repeat Analyzer" version="2.3.8.1" > |
2 <stdio> | 2 <stdio> |
3 <regex match="Traceback" source="stderr" level="fatal" description="Unknown error" /> | 3 <regex match="Traceback" source="stderr" level="fatal" description="Unknown error" /> |
4 <regex match="error" source="stderr" level="fatal" description="Unknown error" /> | 4 <regex match="error" source="stderr" level="fatal" description="Unknown error" /> |
5 <regex match="warning" source="stderr" level="warning" description="Unknown warning" /> | 5 <regex match="warning" source="stderr" level="warning" description="Unknown warning" /> |
6 <exit_code range="1:" level="fatal" description="Error" /> | 6 <exit_code range="1:" level="fatal" description="Error" /> |
26 <requirement type="package">r-optparse</requirement> | 26 <requirement type="package">r-optparse</requirement> |
27 <requirement type="package">r-dbi</requirement> | 27 <requirement type="package">r-dbi</requirement> |
28 <requirement type="package">r-rsqlite</requirement> | 28 <requirement type="package">r-rsqlite</requirement> |
29 <requirement type="package">r-rserve</requirement> | 29 <requirement type="package">r-rserve</requirement> |
30 <requirement type="package">bioconductor-biostrings</requirement> | 30 <requirement type="package">bioconductor-biostrings</requirement> |
31 <requirement type="package" version="2.3.8">repex_tarean</requirement> | 31 <requirement type="package" version="2.3.8.1">repex_tarean</requirement> |
32 <requirement type="set_environment">REPEX</requirement> | 32 <requirement type="set_environment">REPEX</requirement> |
33 <requirement type="set_environment">REPEX_VERSION</requirement> | 33 <requirement type="set_environment">REPEX_VERSION</requirement> |
34 <requirement type="package" version="0.9.1">pyrserve</requirement> | 34 <requirement type="package" version="0.9.1">pyrserve</requirement> |
35 </requirements> | 35 </requirements> |
36 <command detect_errors="exit_code"> | 36 <command detect_errors="exit_code"> |