# HG changeset patch
# User petr-novak
# Date 1618381212 0
# Node ID 4b3af335dca845666c4b93bcc4659a4a0afb8285
# Parent  397394c00bf7d98b9c38b708563d156c55572fbd
Uploaded

diff -r 397394c00bf7 -r 4b3af335dca8 repex_full_clustering.xml
--- a/repex_full_clustering.xml	Fri Apr 09 08:09:53 2021 +0000
+++ b/repex_full_clustering.xml	Wed Apr 14 06:20:12 2021 +0000
@@ -1,4 +1,4 @@
-<tool id="repeatexplorer2" name="RepeatExplorer2 clustering: " version="2.3.8" >
+<tool id="repeatexplorer2" name="RepeatExplorer2 clustering: " version="2." >
     <stdio>
       <regex match="lastdb: can't open file: NEAR" source="stderr" level="fatal" description="Version of last is too old, use ver 956 or higher\n" />
       <regex match="Traceback" source="stderr" level="fatal" description="Unknown error" />
@@ -8,7 +8,7 @@
     </stdio>
     <description>Improved version or repeat discovery and characterization using graph-based sequence clustering</description>
    <requirements>
-     <container type="singularity">shub://repeatexplorer/repex_tarean:0.3.8.dbaa07f</container>
+     <container type="singularity">library://repeatexplorer/default/repex_tarean:0.3.8-dbaa07f</container>
    </requirements>
 <command>
       export PYTHONHASHSEED=0;
diff -r 397394c00bf7 -r 4b3af335dca8 repex_tarean.xml
--- a/repex_tarean.xml	Fri Apr 09 08:09:53 2021 +0000
+++ b/repex_tarean.xml	Wed Apr 14 06:20:12 2021 +0000
@@ -1,4 +1,4 @@
-<tool id="tarean" name="Tandem Repeat Analyzer"  version="2.3.8" >
+<tool id="tarean" name="Tandem Repeat Analyzer"  version="2." >
     <stdio>
       <regex match="Traceback" source="stderr" level="fatal" description="Unknown error" />
       <regex match="error" source="stderr" level="fatal" description="Unknown error" />
@@ -7,7 +7,7 @@
     </stdio>
     <description>Identification of genomic tandem repeats from NGS data</description>
    <requirements>
-     <container type="singularity">shub://repeatexplorer/repex_tarean:0.3.8.dbaa07f</container>
+     <container type="singularity">library://repeatexplorer/default/repex_tarean:0.3.8-dbaa07f</container>
    </requirements>
   <command detect_errors="exit_code">
     export PYTHONHASHSEED=0;