Mercurial > repos > petr-novak > tidecluster

diff tidecluster.xml @ 12:a0f57cfa1bb7 draft default tip

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planemo upload for repository https://github.com/kavonrtep/galaxy_packages commit 0e706a5b6d79e3b33bdc226d806f0fefe718c57f-dirty
author petr-novak
date Wed, 06 Nov 2024 07:16:14 +0000
parents 971dbc97e607
children
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--- a/tidecluster.xml	Tue Nov 05 14:45:01 2024 +0000
+++ b/tidecluster.xml	Wed Nov 06 07:16:14 2024 +0000
@@ -33,10 +33,13 @@
         if [ -f tidecluster_kite_report.html ]; then cp  tidecluster_kite_report.html ${tarean_report.extra_files_path}/; fi
         &&
         if [ -f tidecluster_tarean_report.html ]; then cp  tidecluster_tarean_report.html ${tarean_report.extra_files_path}/; fi
-
         &&
         if [ -f tidecluster_consensus_dimer_library.fasta ]; then cp tidecluster_consensus_dimer_library.fasta ${trc_library}; fi
         &&
+        if [ -f tidecluster_trc_superfamilies.html ]; then cp tidecluster_trc_superfamilies.html ${tarean_report.extra_files_path}/; fi
+        &&
+        if [ -d dotplots ]; then cp -r dotplots ${tarean_report.extra_files_path}/; fi
+        &&
         zip -r output.zip *
         #if $library:
         &&