Mercurial > repos > pieterlukasse > nist_wrapper

comparison nist_wrapper.py @ 8:35e4707e0ac3

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fix
author pieter.lukasse@wur.nl
date Thu, 22 Jan 2015 22:07:40 +0100
parents 165c22633081
children 8c20185752da
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7:165c22633081 8:35e4707e0ac3
309 309
310 # prepare NIST environment for running: 310 # prepare NIST environment for running:
311 new_nist_home = _prepare_NIST(uuid_value, nist_home_dir, nist_ini_file, spectrum_file, is_wine, log_file) 311 new_nist_home = _prepare_NIST(uuid_value, nist_home_dir, nist_ini_file, spectrum_file, is_wine, log_file)
312 312
313 # run NIST search command: 313 # run NIST search command:
314 _run_NIST(new_nist_home, nist_output_file, is_wine) 314 _run_NIST(new_nist_home, nist_output_file, is_wine, log_file)
315 315
316 # write output tabular: 316 # write output tabular:
317 hits_dict = utils.get_nist_out_as_dict(nist_output_file) 317 hits_dict = utils.get_nist_out_as_dict(nist_output_file)
318 utils.save_dict_as_tsv(hits_dict, final_output_file) 318 utils.save_dict_as_tsv(hits_dict, final_output_file)
319 319